Etheostoma cragini (Arkansas darter): 117960728
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Entry
117960728 CDS
T07493
Symbol
nphp1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117960728 (nphp1)
Cilium and associated proteins [BR:
ecra03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
117960728 (nphp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
hSH3
BUD22
Laminin_II
Nop14
NOA36
DUF2457
FAM176
Motif
Other DBs
NCBI-GeneID:
117960728
NCBI-ProteinID:
XP_034754743
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Position
17:complement(5047097..5056356)
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AA seq
712 aa
AA seq
DB search
MPLKRKGRLQLVQREVDEITKQVDSLVKDVQSKNGTTEEAFRRCQELQMLAEKTLRTLKK
LTKADELAPVGNYDQRKQEEERRLLKILECVNTLSLEISPPGPSTAAGNVSKKESKEEDD
DDDDDEDEDEDEDDDDDKDSTDREANGASKDEKQAVKPPWRSDPHIYTALSDFKGEQEGD
LSVQRGEVLRIIRKTVDGWWLAQDAKGNRGVVPKTYLKIGSGIDDDDDNDDDEDEDNDDD
KEEESEEEEEQIGKPTDDQEKQSSSPHSNWSTVRKALTEIDATDVLSAMGAIPSGFRPSS
LSKLLMEEGTTYRGSHYIQPELSQSQLSFSDLFLDPDTGRVRARQVRTCVCFSLWSCKMI
PTPGVGVQVLSRHIRLCAFNGTQVLSNIHTVRATYNSKSPKTWSFSPRMAGILPALLDGD
CFLRCNSASPNLGILFELGVTFIRNSTGERGDLSCGWSFLKLTDDTGNPLPNRTYELPVN
GGTPYEKDVAVEASVTRGSPAGVFQQMLQDRRQPRIIIKMKSSNSRTRTQLRWEDHLLPD
TLLHCLSCIHLLALHRQLLADTLLMDRPTMQNADLICSPILSTFPMLLDQPDLMDALRSA
WLDAETNMSRAQRRDLSYLKREFVKVYMSSVYFLLHSPSLPCHRWADPPVEEQRARVIYA
TLDALKHTQHTTGQSRGPEVFVDPMHQHLAFDITELTFDLLRVSRQQSHQIT
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgccactaaaacgaaaaggacgtttgcagcttgtccagagagaagtggacgaaatcaca
aaacaggttgacagtctggtgaaggatgtgcaaagtaagaatggaaccactgaagaggcc
tttcggagatgtcaagaactgcagatgttggcagagaagacactaaggacactgaagaaa
ctgaccaaggcagacgagctggctccagtgggaaactatgatcagaggaagcaggaagag
gagagacgactgctgaagatcttggagtgtgtaaacacactctctctggagatttcacca
ccaggacccagtactgctgcaggaaatgtttcaaagaaagaaagcaaggaagaggatgat
gatgatgatgatgacgaagatgaagatgaagatgaagatgatgatgacgacaaagacagt
actgatcgtgaagctaatggtgcgagtaaagatgagaaacaagctgtgaaaccgccctgg
cggtcagaccctcacatctacacagccctcagtgatttcaaaggagaacaggagggagat
ctgtctgttcagaggggagaggtattgaggattatcaggaagacagtagatggatggtgg
ctggctcaggatgctaaaggcaacagaggagtggttccaaaaacctacctgaagattggc
tctggtattgatgatgatgatgataatgatgatgatgaagatgaggacaatgatgatgac
aaagaggaggagtcagaggaggaggaagagcagattggaaaaccgactgatgaccaagag
aaacagagcagttctccacattccaactggagtactgtcagaaaggctttgactgagatt
gatgcaacagatgtgctctctgccatgggagctataccttcaggatttagaccatcatct
cttagtaaactgctaatggaggaaggtacaacatacagaggaagtcactatattcagcct
gagctcagccaatcacagctctcctttagtgacctcttcctggatccagacacaggcagg
gttcgtgctcgtcaggtcaggacttgtgtttgtttcagtttgtggagctgcaagatgatt
cctactcctggggttggagttcaggtcctcagcagacacatccgcctctgtgcctttaat
ggaactcaggtgttgagtaacatccacacagtgagggcaacgtacaactccaagtctcca
aagacctggagcttctctccaaggatggcaggtatcctacccgccctcctagatggagac
tgtttcctgcgctgcaactctgcatctcccaaccttggtatcctctttgaactgggagtc
acctttatacgcaattctacaggtgagagaggggaccttagctgcggctggtctttcctc
aaactgaccgatgacactggaaatccactccccaacaggacctatgagctgccagtcaat
ggtggcaccccttatgagaaggatgtcgcggtggaggcatcagtcaccagaggatctcca
gctggtgttttccagcagatgcttcaggacaggcggcagcccagaatcattataaagatg
aaatcatccaacagccggaccagaacgcagctcaggtgggaggatcatctccttccagac
actttactgcactgtctgagctgcatccacttgctggctctacacaggcagctgctagcc
gacacactactgatggacaggcctaccatgcagaatgcagatctgatatgcagtcctata
ctttctacctttccaatgctgttggaccaaccagacttgatggatgctctcaggagtgct
tggctggatgccgagaccaacatgagtagagcacagaggagagacttgtcttatttaaaa
cgggagtttgtcaaagtctacatgtcgtctgtctatttcctccttcactcgccctcgctg
ccctgtcatcgctgggcggacccacccgtagaggagcagcgggccagagtcatctacgcc
accctggatgctctcaaacacacccagcacaccaccggccaatcaagaggcccagaggtc
tttgttgaccccatgcatcaacatcttgcctttgatatcacagagttgaccttcgacctc
ctacgtgtgtcacggcaacagtcacatcaaatcacttag
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