Etheostoma cragini (Arkansas darter): 117960865
Help
Entry
117960865 CDS
T07493
Symbol
ptpn20
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 13 isoform X1
KO
K23955
FERM and PDZ domain-containing protein 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117960865 (ptpn20)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
Other domain-containing proteins
FERM domain-containing proteins
117960865 (ptpn20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
Y_phosphatase
PDZ_6
FERM_M
PDZ_2
FERM_N
FERM_C
KIND
Tc-R-P
SNX17-27-31_F1_FERM
DSPc
RA_2
PTP-NADK
Y_phosphatase3
PTP-SAK
Motif
Other DBs
NCBI-GeneID:
117960865
NCBI-ProteinID:
XP_034755000
LinkDB
All DBs
Position
17:complement(12510972..12538090)
Genome browser
AA seq
2389 aa
AA seq
DB search
MSSTFVTLAEVLEARGGPLLEEEVWSLLLATAESLVDVSYKGQNNMYNIISPTSLLLSAT
GTLAFKNCGLSDEVSTFTAPEMLQGRASSTKPAIERMQVYSLGMTLYWSVDFHLPQNQPV
QLSDHLNSLLLSMCEDLAHRRVNLISILEGCEFQHKATILPPPAQVIKQLVEEVFHESVD
HGSLPDSHVPLSGRSQMIRERLHGKRGPLSDFSEGSGEGRRYSTDSDSKSGSLPQRPWRQ
RPRSSPTPLYQSSLDRLPRGVRHRDSNCSWLGRSPQHDISPKTSGRSHSPSITFSESSLS
LSQRKAKALGPEFVRMQDEQHIILELPGSIVSRKGRSCSSQREVTVVLPNGQYVVVRCDT
KSKARDVFDMVVAHANLVEHFYFGLAFIDDDEYFFLDHETKISKIAPDSWKKGQIFSFLV
FLRIKFFVDDMSFILHRLTRHQYYLQLRKDLLEDRLYCNEETGLFLAALALQAEFGDYMP
ELYGKNYYQPEHYVSKRMLEKLALPNVKEELPRLHASHAQLLPEEAETEYLKIVQQLPEY
GLLFHRVGREKRTVLGELVLGVCAKGIIVYEIKNHLRTVIRRFLWRETDTISTGRRKLII
ECGGPSGKKHSFITESSKIAQYLLNLCSAQHKFHSEMTSRQLNHTIIPDENMENLSVYRC
RNLDLKQMSCSEGMLHHIGLTSGQPDSLSKSCDNLTAKLEARLRQQREMRREMSRELNKE
LTETGDLRDTKEQQCWSTPESIPRMMSSVSLQKQDSEAFSSIRVDTPTRTPPEREIVCVS
LKKDPKLGFGFVIVGEDNTGKLDLGIFIASIVPDGPADKDGRIKPGGRLISLNKTSLEGV
TFNDAAAILQSSPEEVELIVSQPKYYLKDSKSSLSQSTLGLALERSFGSQTTLSGTEYRP
IVEELEDAITLSNMATPKQNRRLHIPVVRIHDAQDFSSRSTSIFSLKTGEQFMVELKKNS
GSLGISVAGGQNTNVRYGGIYIKSLVLGGAAEQDGRIQIGDRLLKVDGSNMRGLTHHQAV
ECLKRTGEVVNLLLEREPTVILEPRLDSPCPPLAHSSSDTQHLRTEVSMETTLSGQAKDY
SFVTDENTHEVVLKKSLSGLGFSFNISRLHSGPDSGSVVRIKRLFPGQPALESGLLREGD
IILSVNKEPVKDLSYQRVLFLLRGAPSEVHLLICRPGPTVLYDADDNTLSPAFYREVRSQ
SLDIRLGEDYSQLLKFSNDLQISTPKQSPTHEEDLKTAEKSSDPHATPAFPDTQESLDGE
NLPSPPRSPPSPTSPISPPSPVSPPSPASQASPASPDCGSPLAPPESQPATDKLEEQEEV
DSSKNKAGKEKEEEDVATTTSSTVMLMDDCPKSALNYVYTSGVREEADGSVTYCLMGNGL
TIMADEEYLTISSTLEPLRNRPSSLAAHTQTTNLTGLHSQISNSSSSFGSQNPCLGPHIP
TTTTSSLLSHSSDTTTTCCLAHPSQPLTTQPPKSKHHPIQQGLLPSHYKAISKNSKPIMP
LPQPPDPPLTPITAQVVPSVPPCASPPALTQPPTILPPPAQSPTQLREEAEKKEREYKYD
DYEENEEEEEESRRKGLVKEFELSVVLTKSRSGSFGFTITRSKLDNCYYIQEILDNPAKA
DGRLRAGDRLVTVNGHDVTNVGDDVAMTILRSSPRRLSMTLGRAVSNLVAPPSCDSLPDI
VLYKTPSGQLGIKLTGGIGSKWQGIYCLQVVPGSPASEEGTVQPSDKILYICGRCTLGMT
LEDAVKACEIAPRKVKLKILREDQPVNPKAKWNGLFDWKKEKKFFARFEEPVSPEKDSPT
EDAEALYRTPGNFRCRSLTQEQDSCIMQVEFTKPEGGGLGFALVGGTNGSMLRVKEICSG
GVAEQDGRLRVGDILLEVNGVIVSGLSHSKVVDILRKAEGTVQLTICRDILPLTYSESPV
PPNLSAHTEAILAEPPAPVSSPDTSSSPDVMLKRPVERPPVISDPLVNEAGVFVTSPPPP
PRRLTVVTDDTEIIQESCNSTPSHQACCPSLNVTDMLHGASERKQIVTKLLDRSYKDIRK
TQSDGWSSEEEDDDVFDSTGREMTSAQTGPPIVSEEELARLALISPATTSQYSGSRVKAL
IQILQHQLDQQELVKEFMALEHLKPSDNCLVGKAPENRDKNRYRDILPYDETRVAIGDNQ
DYINASYIRMQVGDEEFFYISCQGPLPSTVPAFWQMIWENKSDVIAMMTQEVERGRIKCH
KYWPEKLGVPLDSGRYQLHLENYQYLEYFHIKIIRMVETETGETHFVRHLNFTHWPDHGV
PKSSEQLVRFIRYLRAVHHMGPVTVHCSAGIGRTGVLICTDVLLCLIQNDLPIKVSNIVK
EMRCQRHGMIQTKEQYIFCYKVWLEVLQGILQLHGNQWQPESPRDHKVV
NT seq
7170 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacatttgtcacattagctgaagtactggaggcacgagggggacctctgctg
gaggaggaggtctggtccctgctgctggccactgcagagtctttagtggatgtctcttat
aagggtcagaacaatatgtataatattataagcccaacctccttgctgctgtccgccact
ggtacattagcatttaagaattgtggcctatcagatgaggtatccacctttaccgctcca
gagatgctgcagggccgtgccagctcaaccaaacctgccatagagaggatgcaggtgtat
tcactgggtatgactctctactggtcagttgattttcacctacctcaaaatcagccagtc
cagttgagtgaccatctaaacagcctcctgctcagcatgtgtgaggacctggcccaccgg
agggtgaatctcatctccatcctggaaggctgcgaatttcagcataaagccaccatcttg
ccgccacccgcccaagtcatcaaacagctagtggaggaggtttttcacgaatcagtggac
cacggctctctgccagacagtcatgtccctttgagtggcaggagtcagatgatcagagag
agacttcatggaaagagagggccactttcagacttcagcgaaggcagtggtgaagggaga
agatactcaacggactccgactcaaagtcagggagtttacctcagagaccttggagacaa
agaccaaggagctctcccacaccgttgtaccaatcttctttagaccgactccctcgtggg
gtccgtcacagggacagcaactgcagttggcttggtaggagcccccaacatgacatctct
cccaagacatcgggcagatctcacagtccttccatcacctttagcgagtcctcgctcagc
ctgagccagaggaaagctaaggctttgggtcctgagtttgtcagaatgcaagacgaacaa
cacattattcttgagcttccgggatctattgtgtccagaaagggtcgttcgtgttcgtct
cagagagaagtgacagtagtgctgcctaacggacagtacgtggtggttcgctgtgacact
aagtccaaagcaagagatgtgtttgacatggtggtggctcacgcaaacttggtggaacac
ttctactttggtcttgcctttatagatgatgatgaatatttcttcttggaccatgaaaca
aaaatctccaaaattgcacctgatagttggaaaaaagggcagattttctcctttttggtg
tttcttcgaatcaaattttttgttgatgatatgtccttcattttgcacagactgactcgt
caccagtactatttacagctgcgtaaggatctcttggaggacaggctttactgtaatgaa
gagacaggcttgtttctggctgctcttgctctgcaggctgagtttggggattacatgcca
gagctgtatggtaagaattactatcagccagagcattatgtgtccaagaggatgctggag
aagctggccctgcccaatgtcaaggaagagttgccaagacttcatgctagtcatgcccag
cttctgcctgaagaggcagaaaccgagtacttaaagattgtccagcagttgccggagtat
gggcttttgttccaccgtgtggggagagagaaaagaacagtgttgggagagttggttttg
ggagtctgtgccaaaggaatcattgtgtacgagataaagaaccacctccggactgtcatc
aggcgcttcctctggagggaaaccgacaccatatccactgggcgtcgtaaactcattata
gagtgtggtgggcccagcgggaaaaagcacagttttataacagagagctcaaaaatagca
cagtaccttctgaacctctgctcagcacagcacaagttccatagtgagatgacgtcccgt
caacttaaccacaccataataccagatgaaaacatggaaaacctgtctgtctaccggtgt
cgtaacttggacctaaagcagatgtcctgctcagagggcatgctgcaccacataggtttg
acatctggtcaaccagactccctctccaagtcctgtgacaacctgactgccaagctggag
gcgaggctgcgccagcagagggagatgaggagggagatgagcagagagctgaacaaggag
ctcactgaaacaggagacctcagagacacaaaagagcaacagtgttggagcactccagag
tcgattcccagaatgatgtccagtgtctcgctacagaagcaggactctgaagccttttcc
tctatacgagttgatacaccaaccaggaccccaccagagagagagatagtctgtgtgtcc
ctgaagaaagatcccaaactgggctttggctttgtgatagtgggcgaggataatacaggt
aaactggaccttgggatcttcattgcttccattgtgccagacgggcccgcagacaaagat
ggtcgaatcaaacctggtggacgtcttatctcactaaacaagactagtttggaaggagtg
acatttaatgacgctgctgccatcttacagagcagccctgaagaggtggagcttattgtg
tcccaacctaaatactatctgaaggacagtaagagttccttaagtcaaagtactctcggt
ttggcattggagagaagctttgggtcacagaccacactgagtggcacagaataccgtcct
atcgtggaggaactggaggatgccatcactctgtccaacatggcaaccccaaaacagaac
aggaggcttcacattcctgttgtgcgaatccatgatgcccaggatttttcttctagatcc
acctcaatcttcagtttgaaaactggggagcagttcatggtggagctgaagaaaaacagt
ggcagtcttggcatcagtgttgctggaggacaaaacaccaatgtgcgatatggaggaatc
tacatcaaaagtctagtgcttggaggtgcggcagagcaggacgggcgcattcagattggt
gacagactgctgaaggttgatgggtccaatatgaggggcctgactcaccaccaagctgtt
gagtgcctgaagaggactggggaggtggtgaacctgctgttggaaagggaacccacagtg
atcttggagcccagactcgactcaccctgcccccccttggcccacagttcatcagataca
cagcacctaaggactgaagtctccatggaaacgaccttgagtggtcaagccaaggactac
agctttgtgactgatgaaaacacacatgaagtggtgctgaagaagagtttgtctggcctc
ggcttcagctttaacatttcgcggctgcactcaggtccagacagtggcagcgtggttcgt
atcaaacgtctgttcccgggtcaaccagcgctagagagtggcctgctgcgagagggagac
atcattctgtctgtcaacaaagagcctgtcaaggacctctcttaccagagggttttgttc
ctgctacgtggagctccatctgaagttcacctgctgatctgccgaccaggtcctacagta
ctgtatgatgcagatgataacacactgagtccagcattctaccgtgaggttcgatctcag
tctctggacattcgactaggagaggactacagccagctacttaagttttcaaatgatctc
cagatatctaccccaaagcagtcacccacccatgaggaagatctaaaaacagctgagaag
agctcagatcctcatgcaactccagcattcccagacacccaggagagtctggatggggag
aatctcccatctcctcctcgctcacccccgtcgcccacctcacctatatcacctccgtca
ccagtctcgccaccctcacctgcctcccaagcatcacctgcctcacctgactgcggctct
cccctggctccaccagagtcacaaccagccactgataagctagaggaacaagaggaagta
gatagtagtaagaacaaggccgggaaagagaaagaggaagaagatgttgcaacgactaca
agctcaactgtgatgcttatggatgactgtcctaagagtgctttgaactacgtatatacc
agtggagtcagagaggaggcagatggaagtgtgacctactgcctgatgggaaatggtctg
actatcatggcagatgaagagtacctgaccatcagctccacactagagccccttcgtaac
cgtccttccagtctggccgctcacactcaaacaaccaaccttacaggccttcactctcaa
atctccaacagctcctctagttttggctctcagaatccatgcctcggccctcacatcccc
accactaccaccagctcactcctcagccactcgtctgacaccacgaccacttgctgcctg
gcccacccatcccagccgctcacaacccagccaccaaaatccaagcatcatccaatccag
caggggcttcttccaagtcactacaaagccatctccaagaacagtaagcctatcatgccc
ctaccgcagcctcctgatccccccttgacccccattacagctcaggttgtcccttctgtg
cctccctgtgccagtccacctgccctgacgcagccccccacaatactgccccctcctgct
cagagccccacacagctaagagaagaagcagagaagaaagaaagagaatacaagtatgat
gattatgaagagaatgaggaggaggaggaagagagtcgaaggaagggattggttaaagag
tttgagctgtcagtggttctgaccaagtccaggagtggaagctttgggttcaccatcact
cgaagcaaattggacaactgctactacatacaggaaatactggacaacccagccaaggca
gatggacgactcagggcaggagacaggcttgtcacagtaaatggacatgatgttaccaat
gtgggagacgatgttgccatgacaattcttaggtcatctccgagaagactgagtatgacc
ttagggagggctgtttccaacctggtggccccgccatcctgtgacagcctgcctgatata
gtactttacaagacaccttctggacagctgggtataaagctgacaggaggcattggcagc
aaatggcaaggcatctactgtctgcaggtggtgccaggctcaccagccagtgaggagggc
actgtccaacccagtgacaagatcctctatatctgtggcaggtgtactctgggaatgacc
ctggaggatgcagtcaaagcctgtgagatcgcccctcgtaaagtcaagcttaaaatcctc
agagaagaccagccagtcaaccccaaagctaagtggaatggtctgtttgactggaaaaaa
gagaagaagttctttgctcgttttgaagagcctgtttctccagagaaagactctcctact
gaagatgctgaagccttgtataggactcctggaaatttcagatgtcgctctctcacacaa
gaacaggatagttgcatcatgcaagtagagttcacaaaaccagaagggggaggccttggc
tttgctttggttgggggaaccaacggcagcatgctcagagtgaaggaaatctgctctggt
ggagtagctgagcaggatggccggctgagagtgggagatattctattagaggtgaacggt
gtgattgtgtccgggctgagccacagtaaggtggtggatatcctgcgtaaagctgaaggg
actgtacagctcaccatctgcagagacatcctgcccctgacctactccgagtcacctgta
ccgcccaacttgtctgctcacactgaagctattttagccgagccgccggctcctgtgtcc
agccctgatacctcttcctctcctgacgtcatgttgaaaaggccagttgagcgcccccct
gtgatttcagaccctctggtcaatgaagctggagtgtttgttacctcaccacctcctcca
ccacgccggctgactgtcgtaacagatgacactgaaattatacaggagagctgtaacagc
accccttctcatcaagcttgctgcccatccctcaatgtcactgacatgttgcatggagct
tctgaaaggaaacaaattgtgaccaaacttttggaccggtcctacaaagacatccggaaa
acccagtcagacggctggagcagcgaagaagaagatgatgatgtgtttgattccaccggt
cgggaaatgacctcagcacaaacaggcccacccatagtatcagaggaggaactggccagg
ttagctctcattagccccgctacaaccagccagtattcaggctccagggtcaaagctctc
atccagattctgcagcatcagctggaccagcaggaactggtcaaagagtttatggctctg
gaacatctgaagccctctgacaactgtctggtgggaaaagcccctgagaacagagataag
aaccgctacagagacatcctaccctatgatgaaacccgtgttgccattggagacaaccag
gactacatcaacgccagctacatccgcatgcaagttggcgatgaagagttcttctacatt
tcctgccagggccctctgccttccacagtgccggccttctggcagatgatctgggaaaac
aaatctgatgtcattgccatgatgactcaggaagtagaacggggaaggatcaaatgtcac
aagtactggccggagaagctgggtgtgcctctggactccggcaggtaccagcttcacctg
gagaactatcagtacctggagtacttccacatcaagatcatccgcatggtggagacagag
accggtgagacacattttgtccgtcacctgaatttcacacactggcctgaccacggagtg
ccaaaaagctccgagcagctggttcgcttcatccgctacctgagggcagtgcaccatatg
ggaccagtcactgtgcactgcagcgctggcatcggacgcacaggagtcctcatttgcact
gatgttctcctctgcctcattcagaacgatttgcctattaaagtaagcaacatcgtgaag
gagatgagatgtcagcggcatgggatgattcaaactaaggaacagtacatcttctgctac
aaggtctggttggaggttttacagggcattttacagcttcacggcaaccaatggcaaccg
gaaagtcccagagaccacaaagtagtttga
DBGET
integrated database retrieval system
