Etheostoma cragini (Arkansas darter): 117960868
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Entry
117960868 CDS
T07493
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117960868 (tp53bp1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
Tudor_5
Tudor_3
BRCT
DUF4537
BAHCC1-like_Tudor
Tudor_2
Motif
Other DBs
NCBI-GeneID:
117960868
NCBI-ProteinID:
XP_034755058
LinkDB
All DBs
Position
1:31802400..31826611
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AA seq
1777 aa
AA seq
DB search
MDPGGSELDSSLPQPENPCLIVEDSQPDSVALEDDPESSYRALLARRLSSLQPTSRSPVL
METSVQPSIHPSSQPSTIQGHLVRLDERPRGWELISSPLGSRLSQTDSLSESSQSNNQAE
TGILLADNSSSAFQEESQVLNICPPANKRKCAAEDPNMDSGADSTTHCIQSEEGTSQFGF
LELSQSQDLRGEVINSQQEEEEDIVLQPDSETRTKLAEQNISCRTSESQDNKAVRSEVSS
SSSLEPPGPSGRQLSVQALLHSQAPGEQGEQDCEILSSQEDMFDADKTGAAVDSTVSEPE
QQAHPTSTPAHTLRLLHLSGQGTLVQESLSQSSVDYVAPTQDNFTHTPLIVPNSPTGPEN
EHGADEAMDTSLPPEDRAGEKEEPMETEADSKPHPSASTPLSQNSPGFVLERALAIPSQP
EFSHDVFVPTQSQEAPQQSDKKMTSLPRETQSQQLESAAFTLPLQLSMNTQSSSPAQKEL
IEEDSQATQIEELEEPPAVDTSDSVVSHQRSESNGVSSESQTATSSKASAFAKSPKHRSE
CATKEPSNLSQQSDVHKKTSWNVQDVNVKDRKSDNKEACSADAVSCSQPKFDPSDLTVNS
CVQETPPDTTPCSLSSQSMISITSVVDVVKGSVDLRKEGGTAKSPSVKSFSQKCGTGGNS
QTVKDVMDEPVQGEVEEEVVMEEGESAFGGGASGMALALSQSQLLSPEPVERESGDRGED
SVIVVTDSEGDSQVLQKDVSSQSKTNSSQPIGGNVSISTNGHESQAQAKKVHPAPDRFSQ
TERVGPEPEGLKDKSLSDSSGEISFHFTLPKEGELIGPAVGATPPLISQLKQTLRHSTPI
EISSFSEKSGVVGDVSADGAMAASDIVSGESGDDTTEKGDGKLSLRMKLVTPVEEGSSER
FSLQKPALSEEDESVVKVTTVAKAVTSSPSVFSRVRQVHRQQEPREDSQAGGNTTPVREE
LFASPQSSSQASSLGCNSLPNSQSEPSQQEALAAPQESLKDPPGPTEQSGDKQGPPQAPE
PPTPNRTDGSQRALQQTIASSPSNKLRQRTVSQQTSFDTPGLRSPAGRGEPESPSFRRTA
APAHRRHVRTIQEVRTTVTRVITDVYYEDGKEVERKVTEETEEPVVDCQVLDGDISPCRT
GSSSLTSGDLADISSLSSKASSLQHSSGGTSSSGFTRPDFIMPPSRGAVSFSPRRGGGQQ
QRGHRGQRAGSVVTMHRGDSTLGSRAFVPLIPRGRARRGRPPSRSSMSRGGGVGSQQRLG
AHGQPQSSSEDELYTRMLPPRLPVSPTDAELPSHSDSLRSSPEEASSARSSFVGLRVVAK
WSSNGCFYSGRIMKDIGEGRFRLRFDDGYECEVAGKDILLCDPIPLETEVTALLEDEYFS
IGVVRGHKTEGQELFYSVEKDGQTQWYNRTAIILSLEQGNKLREQHSLGPYEPSTTLSKA
SDISLDNLVEGKRRRRGGPEGQNTPNRSSSSSPRTPGPSGKRKLMASEDNRTPAKRGRRG
SGVKAAQRAGLCNTSGSGTDLPAQSCDVGDTHGPLPQNTTLFMGFAFMLTTSSEIDRLTN
KHSSDDEEDYVQTGPYNKAYTESQLQAGGGFVLPDFNEEQCKAAYQSLLIADQHCRTRKY
LLCLASGVPCVSHIWVRDCCKENKLLNYRNYLLPAGVGPDETIVEWHPRCSPFKALRVLL
VFEKPVELWAQLITLGGGSSIRQFQTDKDGLDIPAGKYDVVVTDRACPPLVEKNVTSQKV
PLVSPEWLIQSVIRGERLGFHSKPQYRHDYSSSTASS
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggtggaagtgaactggactccagcctgcctcagcccgagaacccgtgtctg
atcgtggaggactcccagccggacagtgttgctctggaggacgaccccgaaagcagctac
cgagctctgctggcccggcgcctgtccagcctgcagcccacctcccgcagtccggttctg
atggagacatcagtccagccatccatccatccatccagccagccatccactattcagggt
cacttggtgagactggacgagaggccgagaggctgggaactgatatcttccccgttagga
agcagattatctcagactgatagcctatcagagagctcccagagtaacaaccaagctgaa
acaggcattctcctggcggataactccagttctgcattccaggaggaaagtcaagttcta
aacatttgccctccagccaacaagagaaagtgtgcagcagaggaccctaatatggattct
ggagctgattctaccacacactgcattcagtctgaggagggaacctctcagtttggtttt
ctcgagctttctcagagtcaggatctgcgaggtgaagtgatcaacagtcagcaggaagaa
gaagaagacatcgtactgcagccagacagcgaaacacgcaccaaattagcagagcagaac
atcagctgcaggacttcagagagtcaggacaacaaagcagtgagatctgaggtgagctcc
agcagctcgttggagcctccgggtccgtcagggaggcagctgagcgtccaggctcttctg
cactctcaggcccctggtgagcagggcgagcaggactgtgagatcctgtcctcgcaggag
gacatgttcgacgctgacaagacaggtgctgcggtggacagcacagtgtctgagccggag
cagcaggctcaccccacttcgacaccggcccacaccctgcgactgctgcatctgtctgga
cagggaacactagtgcaggaaagcctgtcccagagctctgttgactatgttgcccccacc
caagacaacttcacccacacccctttaattgttcccaattcaccaactggaccagagaat
gaacacggtgctgatgaagcgatggatacttcactgcccccagaagaccgagccggagaa
aaggaagagccaatggaaacggaggcagactccaagccacacccgtccgcctcaactcct
ctatcccagaattcccctggatttgtgttggagcgagctctcgctataccctcccagcca
gagttctctcatgatgtgtttgtcccaacgcagagccaagaggcaccacaacagtcagat
aagaagatgacatcattgcctcgcgagacacagtctcaacagctggagtcagctgctttc
actttgcctttgcagctctctatgaacacacagagcagtagcccagcccagaaggaactc
attgaggaggacagccaggccactcagatcgaggaactggaggagccgcccgctgtcgac
accagcgactccgtggtttcacaccagaggagcgagagcaacggcgtctcttcagagtca
caaaccgccaccagttctaaagcttccgcctttgctaaatcaccaaagcatcgcagtgaa
tgtgccacgaaggagccgtccaatctgtcgcagcagtctgacgtgcacaaaaagacctct
tggaatgtgcaagatgtgaatgtaaaagaccgtaagagtgacaacaaagaggcgtgctct
gctgacgcagtgtcctgctctcaaccaaagtttgatccctccgatctgactgttaacagc
tgtgtccaggagacccccccagacactacaccatgcagtttgtcctcgcagtctatgatc
tctatcacatctgttgtggatgtggtgaagggttctgtagacttgaggaaggaaggagga
actgcaaagagtccttccgtaaaatcgttttcacaaaagtgtggaacgggtggcaacagt
caaactgtcaaagacgtgatggatgagcctgtgcagggcgaggtcgaagaggaggtagtg
atggaggagggggagagcgcatttggaggcggggcctcaggaatggctctggccctctcg
cagagccagctgttgtctcctgagcccgtggagcgggagagcggcgacagaggagaggac
agtgtcatcgtcgttacagacagcgagggagactcccaggttcttcagaaagacgtgtca
tcacaatcaaaaaccaacagttcccagccaatcggaggcaacgtgtccatctccactaac
ggccacgagtcccaggcgcaggcgaaaaaggtgcacccggctcctgataggttctcccag
actgagagggtggggcctgaaccagagggtctcaaagacaagagcctgagtgatagctcg
ggagaaatttccttccacttcacacttcctaaagaaggggagctgattggtcctgctgtc
ggggccacgccccctctaatcagccagctgaagcagacgttgagacacagcactcccatc
gagatcagttccttttctgaaaagtcaggcgtggtgggggatgtctccgcagacggggca
atggcagccagtgacattgtgtcaggggaaagcggggatgacacgacggaaaagggagac
gggaagctgagtttgaggatgaagctggtgacccccgtcgaagagggcagctcggagcgg
ttcagcctgcagaagccagcactatcagaagaggatgaatctgttgtcaaggttaccact
gttgccaaggctgttaccagcagcccgtcagtgttcagtcgtgtcagacaggtgcacaga
cagcaggagccaagggaggacagccaggctggaggcaacaccacaccggtcagagaggag
ctgtttgcctcgccacagagtagctcccaggcgtcctcgctgggatgcaacagcctcccg
aacagccaatcagagccttcacaacaggaagcgttggcagcaccgcaggagagccttaag
gatcctcccggccctaccgagcagtctggggataagcaaggaccccctcaagctccagag
ccacccaccccgaacaggaccgatggcagtcagagggctcttcagcagaccatcgcctct
agtccgtccaacaagctccgtcagcggacagtctcccagcagaccagcttcgatacaccg
gggctccgctccccagctggcaggggtgaaccagagtctccgtcctttagaagaaccgca
gcccccgcccaccgcagacacgtgcgcaccatccaggaagtacgaaccaccgtcacacgg
gtcatcacagacgtgtattatgaggacggcaaagaggtggaacgcaaagtcaccgaggag
acggaggagccagtggtggactgccaggtgttggacggcgacatctccccgtgccgcaca
ggcagcagctctttgacctctggtgacttggctgacatcagctctctgtcgtccaaggcc
tccagcctgcagcacagctccggaggaaccagcagcagcggcttcaccaggccggatttc
atcatgccgcccagtcgaggggccgtatccttcagtcccaggaggggaggcgggcagcaa
cagaggggtcacaggggtcaaagggcagggtcagtggtcacaatgcacagaggtgacagc
accctggggtcccgggccttcgtcccgctgatccccagaggaagggctagaaggggccgg
cccccatcccggtcctccatgtcaaggggagggggtgttggctcgcagcagaggctcggt
gctcacggccagccacagtcctcctcagaggatgagctgtacacccgcatgctccccccg
cgcctccccgtaagccccacagacgccgagctgcccagccactccgactccctcaggtca
tcgccggaggaggccagctcggccagaagcagcttcgtcggcctgcgggtggtagccaag
tggtcgtccaacggctgcttctactccggccgcatcatgaaggacatcggggaggggaga
ttccgcctgcggtttgatgacggctacgagtgcgaggtggcggggaaggatatcctgctg
tgtgatcccatccccctggagacggaggtcaccgctctgctggaggacgagtacttcagc
ataggtgttgttaggggccataaaacagaggggcaggagctgttctacagtgtggagaag
gatggacagacgcagtggtacaacaggaccgccatcatcctgtctctggagcagggaaac
aagctgagagagcagcacagcctcgggccctacgagccctccactaccctgagcaaagcc
tccgacatcagcctcgataacctggtggaggggaagaggaggcgcagaggaggccccgag
ggtcagaacactcccaaccgcagctcctccagcagcccccgaacccccggcccctctggc
aagaggaagctgatggcctccgaggacaacaggacgccggccaagagaggccgcaggggc
tctggggtcaaagccgctcagcgggccgggctgtgtaacacctctggcagcggcacagac
ctccccgctcagtcgtgtgacgtgggggatactcacggcccgctgccccagaacacgact
ctcttcatgggcttcgccttcatgctgacgacctcgtctgagatcgaccggctgaccaac
aagcacagcagcgatgacgaggaagattatgtgcagacaggtccatataacaaagcatac
acagagtcccagctgcaggcaggtggaggctttgtcctgccagacttcaatgaagaacaa
tgtaaggcagcttaccagagcctgctcattgcagaccagcactgtcgtacgaggaagtac
ttgctgtgtttggccagcggcgtgccgtgtgtgtcgcacatctgggtgcgagactgctgc
aaagagaacaagctgctcaactacaggaactatttattgcctgccggtgtaggaccagac
gagaccatagtagaatggcatccacgctgcagcccgttcaaagctctgcgggtccttctg
gtgtttgagaagccagtggagctttgggcacagctgataaccttgggtggaggttcttct
attcgacagttccagacagacaaagatggcttagacattccagcgggcaagtatgatgtt
gtggtgacagaccgtgcctgtccgccattggtagagaaaaacgtgacatcgcagaaagtc
ccactggtgtctcctgagtggctcatccagagtgttatccgtggggagcgcctgggtttc
catagcaagcctcagtatcgccacgactactcctcctccaccgcctcctcataa
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