Etheostoma cragini (Arkansas darter): 117960921
Help
Entry
117960921 CDS
T07493
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117960921 (btaf1)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117960921 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
117960921
NCBI-ProteinID:
XP_034755121
LinkDB
All DBs
Position
17:complement(21960628..21988119)
Genome browser
AA seq
1851 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNSLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWNPVPKPKEEDLSPEDSSCDRLSFYHFDISRLLKHGASLLGSAGA
EFELQDDKTGEMDPKERLARQRKLLQKKLGLDMGAAIGMDTEDLFNDEDLDYRCQPTGLK
AHGSKATAGSSSHNHVPIQASELIDSEFRPGMSSRQKNKAKRMAKLVAKQRSKDVDPNEK
SNDSLEGEPEEKRRKITNVVIDQPATQHNVLIDNVPDNSSLLEEMQEWPLESFSEELCND
LFNPSWEIRHGAGTGLREIIKSHGAVGGKLVGSTAEQMSRQHQEWIEDLVIRLLCVFALD
RFGDFVSDEVVAPVRETCAQTLGVALRHMNETGVSMTVDVLLTLLKEDQWEVRHGGLLGI
KYALAVRQDLISVLLPRVLPAITVGLQDLDDDVRAVAAAALIPVVEGLVQLLPNKVPFIV
NTLWDALLDLDDLTASTNSIMTLLSSLLTYPQVRQCSMQQSLTVLVPRVWPFLRHTISSV
RRAALETLFTLLSKAKESCAMWINPILQDMLRHIFQSCILESNEEILELIQKVWSELLSQ
APQQYVVAASCPWMGAWLCLMMQASHMPIDLNMLLEVKARSKDKAGAKARQGTNQVKETV
QEYIAGAETVTDDPVTRDYVVVRSRLMAAKLLGALCRCICDPQVNAASQEIRPAESLGHL
LLFHLNSKSALQRIAVALVLCEWAALQKDCQVVSAMVQPRLLAILSEQLYYDEIAIPFTR
MQNECKQLIALLADANIDLQDRLNCSVFTIDQANELVTTIFTESTAGLNVKSSQWQALDG
KRQQAQVTVMETNTEWQQLHLRVHMFAACAVINLQVLPDKLNPLVRPLMETIKREENTLI
QGYAASFIAKLLQQCAARSPCPNPKIIKNLCASACVDSAVTPSSACPVPPTQENAKGSGL
EKDCMHHMVNKTRGIITLYRHQRAAFAITSKRGPAPKAPKAPTTELPPGCTISTDNDESK
KPFLIQRRGAEFSLTTVARHFGADFTKSLPYLWENTVGPLKTVVTENQRIDRLVQLERGD
AAAQELVNSLQVLEVMAAAMAAELKPLLLEHLPHLFTCLQHPYTAVRHMAARCVGVLSKI
AMLETMNGFLECVLPWLGAIEDCTKQEGAIESLACVMEQLDVDIVPYIVLLVVPVLGRMS
DPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLICQKARERSFLEQLLDSRKLENY
KIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRVQEY
AKTKAADSTPLPSLVVCPPTLTGHWVDEVGKFCTKEYLNPLHYTGPPTERMRLQHQVKKH
NLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRVILSGTPI
QNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEALHRQV
LPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVEDSIANTSTEEE
EKPKLKATGHVFQALQYLRKLCNHPSLVLTPQHPEYKRITEQLAGQNSSLRDLQHAPKLS
ALKQLLVDCGLGGGAGSEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPSVTYLRL
DGGVQAGLRHAIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAM
DRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQDNASLQSMGTDQLLNL
FSLDKGEKGEQSASSSGKSSIKSVLDGLGELWDQQQYDTEYNLDSFMHSLH
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatcaagacttgatcgtttgtttatcctgcttgacactggaacaaccccagta
accaggaaagcagcagcccagcagcttggagaagtggtcaaactccacccccatgaactc
aatagcctcctatcaaaggtcttgacctaccttaggagtcccaattgggacactcgaata
gcagcgggccaggctgtagaggccattgtgaagaatattcctgaatggaacccagtgccc
aagcctaaagaagaagacttgtctccagaggactcctcttgtgaccggttgagtttctac
cactttgacatctcccgcttacttaaacatggggcctctctgctgggatctgctggggct
gagtttgagctgcaggatgacaaaactggtgagatggaccctaaggaacgtcttgcccgt
cagagaaagcttcttcagaagaagctgggtctggacatgggtgctgctattggcatggac
acagaggatttgtttaacgatgaagacctagactatagatgccaacccactgggcttaaa
gcccatggaagcaaagccacagctggatccagctcgcacaaccacgtgcccattcaggct
agtgagttgatcgactctgagttccggccaggcatgagcagtcgtcagaagaacaaggct
aagaggatggccaagctagtggccaaacaaagatccaaagatgtggatccaaatgaaaag
agtaatgacagtcttgagggggaacctgaagagaaacgcaggaaaatcaccaatgtagtt
attgaccaaccggcaacgcagcataacgtcttaatcgacaatgttccagataactcaagt
cttttagaggagatgcaagagtggcctctggagagcttcagtgaggagctctgcaatgac
ctcttcaatccttcatgggagattcgtcatggtgcaggcacagggctaagagaaatcatc
aagtcccatggtgctgtaggcggaaagctggtgggaagcactgctgaacagatgtcacgg
cagcatcaggagtggatagaggacctggtcatccggctgctctgtgtttttgccctagac
cgctttggagattttgtatctgatgaggtggtggctcctgtcagggagacgtgtgcccag
accctcggtgtggcccttcgccatatgaatgaaaccggagtttcaatgacggtagatgtc
ctgctaacgctgctaaaagaagaccagtgggaggtccgtcatggaggcttgcttggcatt
aagtatgccctcgctgtccgacaggacctgatctctgttttacttccccgggtgctccct
gccatcactgtaggcctacaggacctagatgatgatgtcagggccgtggcagctgcagct
ctaatccctgtggtggaaggcttggtacagctacttcccaataaggtacccttcatcgtg
aacacactatgggatgctcttttggacctggatgacctcactgcttccaccaacagcatc
atgacattgctgtcctcactgctcacctacccgcaggtccgccagtgcagcatgcagcag
tcattaacagtcctggtccctcgggtttggccgttcttgagacacactatatcatcagta
agacgggcagcactggaaacccttttcacactgctgtctaaagctaaggagagctgtgcg
atgtggatcaaccccatcctacaagacatgctgcggcacatcttccagtcctgtatactg
gagagcaatgaggaaatccttgaactgattcaaaaggtgtggagtgagctgctgtctcag
gccccacagcaatacgtggtagcagccagctgtccatggatgggagcctggctctgtctc
atgatgcaggcctcacacatgcccatagacctgaacatgctgctggaagtgaaggctcgc
tccaaggacaaggctggtgcaaaggcacgtcaaggaaccaatcaggtgaaggaaacggtc
caagagtatatagcaggtgcagagacggtgacagacgacccagtgacaagggactatgta
gtggtccgttctcgcctcatggccgccaaattgctgggggctctgtgtaggtgtatctgt
gaccctcaggtcaacgctgcatctcaggagatccgaccagctgagtctttaggtcacctg
ttgctcttccacctcaactctaagtctgccctgcagcgcatagctgtggctctggtgctt
tgcgagtgggctgcactgcagaaggattgtcaggtggtgtcagccatggtgcagcctcgt
cttctggccattctgtcagagcagttgtactatgatgagattgccatcccattcacacgc
atgcagaatgagtgcaagcagctaattgcactgttggctgatgccaatatagacctgcaa
gaccgcctcaattgtagtgttttcactattgatcaagccaatgaactggtaaccaccatc
tttacagagtcaacagcgggtctgaacgtaaagtccagtcagtggcaggcattggatggt
aaacggcagcaggctcaagtaaccgtgatggagaccaacacagaatggcagcagttgcat
ctgcgagtccacatgttcgcagcctgtgcagtaattaacctacaggttcttcccgacaag
ctcaacccactggtcaggcctctgatggaaaccatcaagcgggaggagaacaccctgatc
cagggatatgctgcttcctttatagccaagctgctgcaacagtgtgctgcacgctcgccg
tgccccaatcccaagatcatcaaaaacctctgtgcctcggcctgcgtggactctgcagtt
acaccctcatctgcttgccccgtaccccctacacaggaaaatgccaaaggcagtgggcta
gagaaagactgcatgcatcacatggtcaacaaaacccgaggcatcatcaccctgtaccgt
caccaaagggctgcgtttgccattaccagtaagagggggccagcccctaaagccccaaaa
gcccccaccacagagcttcctcctggctgcaccattagcactgacaatgatgagagcaag
aagccatttcttattcagagacgaggggcagagttctcccttacaacggtcgccaggcac
tttggtgcagacttcaccaagtctctgccatacctatgggagaacaccgtggggccactg
aagacagtagtgactgaaaatcaacgcattgacaggctggtccagcttgagaggggagac
gctgcagctcaggaactggtgaactctctacaagtgttggaagtcatggctgcggccatg
gccgctgaactcaaacctttgctactggagcacctaccccatctattcacttgcctacag
cacccgtacacagcggtgcgtcatatggcggcccgctgtgttggcgtgctcagtaagata
gccatgctggagaccatgaacggtttccttgaatgtgtactcccctggttaggtgctatt
gaggactgtaccaaacaggagggtgccatcgagtctctagcctgtgtcatggagcagctt
gatgtagacattgtaccctacattgtgctgctcgtagtaccagtgctgggccgtatgagt
gaccccagtgatagcatccggtttatggcaacccagtgctttgctacactcatccgtctg
ttgccccttgaggcaggtataccagaccctccagccatgtcagctgacctgatctgccag
aaggccagagaacgcagcttcctagagcaacttctagatagcagaaaattggagaactac
aagattcctgtgcccattaaggctgagctcaggaagtaccagcaggacggagtgaactgg
ttgtccttcctgaacaaatacaagctgcacgggatcctgtgtgatgacatgggccttggc
aagacactgcagtccatctgcattctggcaggagatcactacctcagggtacaggagtat
gccaagactaaggctgcagacagcacccccctgccctctctggtggtgtgtcctcccaca
ctgactggccactgggtggatgaggtgggcaaattctgcaccaaagagtacctcaaccca
ctgcactacactggacctcctacagaacgaatgcggttgcagcaccaagtgaaaaaacac
aatcttatagtagcctcctacgacgttgttcggaatgacattgacttttttagaaatatc
aaatttaattactgtatccttgatgagggtcatgtcatcaagaatgggaaaaccaaactt
tccaaagccattaagcagttggctgccaacttccgagtcatcttgtctggaacgcccatt
cagaacaatgtcctggaactctggtcattgtttgacttcctcatgccgggcttccttgga
acagaacggcagtttgccgctcgctatggaaaaccaatcctggccagccgtgacgccaaa
agttcttcacgggaacaggaggcgggtgtcctggcgatggaggccctacatcggcaggtg
ctacccttccttctcaggaggatgaaggaggacgtcctccaggaccttccgcctaaaata
attcaggactattactgcaatctgagtcctctacaggttcagttatatgaagactttgca
aagtctcgagccaaggccagtgtggaggacagcatcgctaacacctctacagaagaggag
gagaagcctaaactgaaggccacaggccatgtcttccaggcgctgcagtacctgcggaag
ctgtgcaaccacccgagtttggtcttgaccccccagcatccagaatacaaacgcatcact
gagcagcttgcagggcaaaactccagcctgcgggaccttcagcacgcgcccaaactctcc
gctctcaaacagttgctggtggactgcggactaggaggtggcgcaggatcagaggggggt
actgaggctgtggtggcccagcaccgtgtgctcattttctgtcagctcaagagtatgctg
gatattgtggagcacgacctgctgaaacccaaactgccctctgtcacctacctgaggctg
gatggcggggtgcaggcgggcctgcgccacgccatcgtttccaggtttaacaatgaccca
tccattgacgtgttgctgctgacaacccatgtcgggggtctaggtctgaacctgactggt
gcagacaccgtggtgttcgtggaacatgactggaaccccatgagggacctgcaggccatg
gatcgtgcccataggataggacagaaacgtgttgtgaacgtctaccggttgatcacacga
ggcacactggaggagaagatcatgggtctgcagaagttcaaaatgagcatcgccaacacg
gttatcagccaggacaacgccagcctgcagagcatgggcactgaccagctcctcaacctc
ttcagtctagacaagggtgagaagggtgagcagtcggcgtcgagctccgggaagtcgtcc
atcaagtctgtgctggacggcctgggagagttatgggaccagcagcagtacgacactgag
tacaacctggacagcttcatgcactccctgcattag
DBGET
integrated database retrieval system
