Etheostoma cragini (Arkansas darter): 117960949
Help
Entry
117960949 CDS
T07493
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38 isoform X1
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117960949 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117960949 (usp38)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117960949 (usp38)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117960949 (usp38)
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117960949 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117960949
NCBI-ProteinID:
XP_034755169
LinkDB
All DBs
Position
2:11725366..11736497
Genome browser
AA seq
1043 aa
AA seq
DB search
MENHTIIMDKILEGLVSSDHSIPVKRAIVKKVVEAAEKAVTEEQCKALFTLTTRFILLGE
DAFQRQIGFQVLEAYARYHRPEFEHFFSKDFVLSLLQQGYGQLDRKDPAIIDYIHCCLRL
LISCPSVLEIFSVIQVEVLRMVCERPEPALCAHLSTLLSDFVQCIPRDKSGVLFCQQLVR
TISYFHCFVSQERELREYVGQVTKVSTLLQNIWKADPATLLPSLQEVFAIISSTDPSFDP
SISLASLVQHIPVQMITVLIKSLTTDHNVKDASMTKALCRMIDWLSWPLAQHVDTWVIAL
LKGLAAVQKFTILIDVTLLKIELVFSRLWYPIVRQGALAVLSHMLLSFQHSPEAFHLVVP
HVVHLVQSLRTDGLPTSKAFLLQFTELIHCMMYQYSGFPDLYDHILEAIKDLPKPGEDKI
KLVLNQSAWTSQSNSFASGPLRQVGKSETGKTGLVNLGNTCFMNSIIQTLFMATDFRRHV
LSLHINGSNTLMKKLQLLFAFLAHTQRAAYAPKNFLEASRPPWFNVGSQQDCSEYLRFLL
DRLHEEEKTLQVLESVKPKVPPPVDSSSKDPSGQTSPEDGEESYLTPAEDKPENDGRTLT
ERMFGGKLITGIRCMQCNCISEKEEPFTDLSLAFCPSATSQGSPQPEGPSEEPKGSVNGG
SEVPEPGLAKASASNVHFVPATNEPPLSVPDLVNYFLAPEILDEENAYFCEKCSSLQRAE
RTMKVVSAPEYLILTLLRFSYDAKCHVRRKILDNVTIPPIMRLPVHAPSMPKQCSSNTSS
PLQVDSPESSENLAKKLKPSQKDDEEEGDERIDGAEEINGGGEMTVQSVPYVLSSVVMHS
GMSSESGHYYSYGRNINGADGTQHPAKHFALKEGLGNDQAECSLSTCSALSIPPEQGNTQ
PNSGQEARDWLLFNDSRVTFTCFQSVQNITNRFPKDTAYVLMYRKQELPGQNINGGLMAN
GIRLSTEPPLQKELLDAIIKDNKLYLQEQELTARTQALQAPSSSCSFRPNGSDDNNPPGS
CGPSGGGGGGGGGGFNTISRLVF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccataccattatcatggacaagattttggagggccttgtgagctctgatcac
tctattccagtgaagagggccattgtgaagaaagtagtggaagcagcagagaaagcagtg
acagaggagcagtgtaaggcattgtttactctcacaacccgcttcatcttgcttggtgaa
gatgcctttcagaggcaaatcggcttccaggttttggaagcctatgcacgttaccaccgc
ccagagtttgagcatttcttcagtaaagactttgtcctcagtcttctccagcagggctat
ggccagctggaccgcaaagacccagccataatagactacattcactgctgcctgcggctg
ctcatcagctgtccctcggtgctcgagatcttcagcgttattcaggtggaggttttaagg
atggtgtgtgaacgtccggagcctgctctttgtgcccacctgagcactttgctgtcagac
ttcgtgcaatgcatcccgagggataagtcgggcgttttgttctgccagcagctagtgagg
accatcagttacttccactgctttgtcagccaagaacgggagctgagagaatatgtaggt
caagtgactaaggttagcacactgctgcaaaacatctggaaggctgatccagccacactg
cttccatcactgcaagaagtgtttgccattatctcttccacagacccctccttcgaccca
tccatttctctggccagtctggttcagcacatccccgtccagatgatcacagtgcttatc
aagagtctcaccacagaccacaatgtcaaagatgcaagcatgactaaagcactctgcagg
atgattgactggctttcttggcctctggctcaacatgttgatacctgggtcattgctctg
ctgaaaggactggctgcagtacagaagttcactatcctcatagacgtcactctgctaaag
attgaactggtattcagtcgtctgtggtaccccattgtgcgacagggagcgctagctgtg
ctctcccacatgctgctgagtttccagcactctccggaggccttccatttggttgttcca
catgtggtgcatctcgtccagtctttgaggacagatggtctccccaccagcaaagcattc
ttgctgcagttcactgagcttatacactgcatgatgtaccagtactccggcttccctgac
ctctatgaccatatactagaggccatcaaggatctcccaaaaccaggagaagacaagatc
aagctggtgttgaatcaaagtgcctggacgtcccagtccaactcatttgcctcgggtcct
ctgaggcaagttgggaagtctgagaccggcaagactggcctggtcaacctggggaacacc
tgcttcatgaacagcatcatccaaaccctcttcatggccacagatttcaggcggcatgtt
ttgtcattacatataaatggttccaacacattaatgaaaaagctccagctcctctttgct
ttcctagcacacactcagagggcagcatatgctccaaaaaacttcttggaagcgtctcgg
cctccctggttcaatgtcggctctcagcaggactgttcggagtacctccggtttcttcta
gacaggttacatgaagaggagaaaacacttcaagtcctggaatcagttaagccaaaggtc
cccccacctgttgactctagcagcaaagacccctcaggccagacttctccggaggatggt
gaggagtcatatttgactccagcagaggacaaacctgagaatgatgggagaactttgaca
gagagaatgtttggtgggaagctgatcacaggtattcgctgtatgcagtgcaactgcatc
tctgagaaagaggagccttttacagacctctctttggccttctgtccttctgccacctct
cagggcagccctcaacctgaaggaccctcagaggaacccaagggatctgtcaatggcggc
agtgaagttcctgagccaggcttggccaaagcctcagctagcaatgtccattttgtgcca
gcgacaaatgagcctcctctctctgtgcctgacctggtgaactatttcctggctccagag
atcctggacgaagaaaatgcctatttctgtgagaagtgtagctccctccagcgggcagag
cggaccatgaaagtggtgtcagcaccggaatacttgatcctcactctgctgcggttctca
tatgatgccaaatgccacgtgcggagaaagattctggacaacgtcaccatcccgccaatc
atgagacttccagtacatgccccttcaatgcctaagcaatgttcctcaaatacatcttct
cctctgcaagtggattctcctgagagcagtgagaatctggccaagaagctcaaaccatct
caaaaagatgatgaggaagagggggacgagaggatagatggagcagaggagataaatgga
ggaggagagatgacagtccagtcagtgccatatgtcctcagctcagtggtgatgcattct
ggtatgtcgtccgagagtggccactactattcttacgggcggaacattaatggcgcggat
ggaacacagcatccagccaaacactttgccctcaaggagggtttggggaatgaccaggcc
gagtgtagcctctccacttgctcagctctctcaattccacctgaacaaggaaacacacaa
cctaatagtggccaggaggcaagggattggctgctgttcaacgatagcagggtgacgttc
acgtgcttccaatcagtgcaaaacattacaaatcgcttccccaaggacacagcttatgtg
ctgatgtacaggaaacaggaactaccagggcagaacataaatgggggactgatggcaaat
ggaatcagattgagtactgagcctcccctacagaaagaactactggatgctattatcaag
gacaacaagctgtatttacaggaacaggagctcaccgctcggacccaggctctccaggct
ccttcatcctcctgctcgtttaggcccaacggctcagacgacaataacccaccagggagc
tgcggcccatctgggggaggtggaggtggaggaggagggggcttcaataccattagtaga
ctggtcttctga
DBGET
integrated database retrieval system
