Etheostoma cragini (Arkansas darter): 117961179
Help
Entry
117961179 CDS
T07493
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117961179 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117961179 (herc3)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117961179 (herc3)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
HECT type E3
117961179 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
117961179
NCBI-ProteinID:
XP_034755555
LinkDB
All DBs
Position
2:complement(12194706..12217526)
Genome browser
AA seq
1043 aa
AA seq
DB search
MLCWGNAKDGQLGIAMERNPMFEPMNCHVFSGRGLKEIACGGQHSMFLLHDGSVYTCGSN
SCGQLGHNKPGTSPELVGALDTQTITMLSSGRAHSMAVNEQGQVFAWGAGEGGQLGLGTA
EEAVRIPRLVRRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNNSGQLGLGKGEPSRLLP
YPLKSLAGIPFAQITTGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVHISCGEEHTAALTKDGGLFTFGEGSWGQLGHGSTNNELLPRRVVELMGSEVSQITC
GSYHTLAFVPSSGAVYAFGCNSHGQLGTGMRGDAKSPLPVKASFLTGNVHTTVTRIISGG
DHSFLLYSNDQSYVPPEDFRVINVSKSISQINYERLNSWRLKLMYSTDSNVKKDIIIQLS
STACWNGSFLDQSDDTHFKTNPKIPGIDLNSVRKLFETLSKPAFSGLLEQATKSFESMMI
PQLPRSPPDVEAMRIYLILSEYPALMDSKNYIRLTIPLAMAIIRLDANPGKVLDNWWCLL
ENSVFTRMVDMYKSIVVFMLTGGKALLVPVFYDNYLDATLRLLEKLHQVNLRANHVEYNH
FYIPDITSLVDIQEDYLKWFLSKADIKAGSVPRSQSDVPAVNLCAYPFILNAQAKTTMLQ
TDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRDHLVSDTLRELTMYSDVDL
KKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFSYYKESNLLWFSDKCFVEQNW
FHLIGIICGLAIYNSTVVDLHFPLVLYKKLLDVPSTLDDFKELSPTEARSLQQLLDYEGG
DVEETFLLNFAITRENYGLTEVKELIPGGESISVDKNNRKEFVEAYLRYVFLDSVSEQYS
AFSSGFLKVCGGDILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYTATHPTVRLFWE
VFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNLLDMPRY
QTKEILCRRLTRAVEQYEGFSLV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgcaaaggatggacagctgggtattgctatggagaggaacccc
atgtttgagccaatgaactgtcatgtgttcagtggcaggggcctgaaagagatagcctgt
ggagggcaacactcaatgttcctgctgcatgatggtagtgtgtacacatgtggttctaac
agctgtggacaactgggccacaacaaaccagggacttccccagagcttgtaggagctctg
gatactcagacgataacaatgttgtcgagtggtcgggcccattcgatggcggtgaatgaa
cagggtcaagtgtttgcgtggggagccggtgaagggggccagcttggtctggggactgca
gaggaggctgttcgaatcccaaggttggttagaaggctgtgtgaccaccggatctctcaa
gtaatgtgtgggaatcagcactgcgttgcactttctagagatggtcagctgttcacatgg
ggccagaacaacagtggtcagcttggtctggggaaaggagagcccagcaggctgctgcct
tatcccctgaagtctctggctggtattccctttgcacagataaccaccgggggagaccac
agctttgctctctctttgtccggagctgtatttggttggggcaagaacagagctggacaa
ctgggtctcaatgataaacaagaccgtgctgttccgtgccacatcaaatttttgagatct
caaaaagttgttcatatcagttgtggagaagaacatacagcagccctcacaaaggatggc
ggcttgtttacatttggtgaaggctcgtggggtcagctgggtcatggctccaccaataat
gaacttttacccagacgagtggtggagctcatgggctctgaggtgtcccagatcacctgt
ggcagctaccatacgttggcctttgtgccttcctctggtgcggtgtatgcatttggctgt
aacagccatggccagcttggcacaggaatgcggggggatgctaagagcccattacctgtc
aaggccagtttcctgactggaaatgttcatactacagtgaccagaatcatcagtggagga
gaccatagcttcttattgtactctaatgatcagagttacgtccccccagaagacttcaga
gtgattaatgtcagtaaatcaatctcccaaatcaattatgaaagattaaactcatggcgg
ttaaagctgatgtacagcacagattccaatgtcaaaaaagacatcataattcaactctcc
tctacggcttgttggaacggcagctttttggatcaaagtgatgatacccacttcaaaacc
aacccaaagatccccggcatcgatctcaactctgtcagaaagctatttgagacgctaagc
aaacccgctttctctggacttctggagcaggccactaagagttttgagagtatgatgatc
cctcagctgccgcgctcccctcctgatgtcgaggccatgaggatttacctcatcttgtct
gagtatccagccctgatggactccaaaaactacatccgcctcactatccccctggcaatg
gccattatccgcctagacgccaaccccggcaaagtattagataactggtggtgtttattg
gagaacagcgtgttcaccagaatggtcgacatgtacaagagcatcgttgtgttcatgctg
acaggaggcaaggcgctgctcgtaccagtgttctacgacaactatttagatgccacgctg
aggctgctggagaaactccaccaggtaaatttaagggccaaccatgtggagtacaaccat
ttttatatccctgacataaccagcctggtggacatccaggaagactacctcaaatggttt
ctgagtaaagctgacattaaagcgggatcagtcccccgttcacagagtgacgttcccgca
gtgaacctatgtgcctacccgttcatactgaacgctcaagccaagacaactatgctgcaa
acagatgctgaactgcaaatgcagatggcagtaagcggtgcaaacttacacaacgtcttt
atgctgctcacactggaaccccaccttgctaggaacccttacttggtgctccatgttcgc
agggaccatttagtaagtgacacactacgtgagctcaccatgtactcagatgtggacctc
aagaaaccgctcaaggtgatctttgatggagaggaggccgtggatgcaggtggagtaact
aaagagtttttcctgctgctgttaaaggagctgatggatcctgtatatgggatgttcagt
tattacaaagagtccaacctgctgtggttctcagacaaatgttttgttgagcagaactgg
tttcacctgatcgggatcatctgtggtctggccatctacaactccacagtggtggacctc
cactttccactcgttctctacaagaagctgctcgatgtgccatcaacgctggacgacttc
aaggagctctcccccaccgaggccaggagtctacaacaacttctggattatgaaggaggt
gatgtggaggagacgtttcttctcaactttgctatcaccagagagaactacgggttgaca
gaagtcaaggagctcattcctggaggagagagcatcagtgtggacaaaaacaacaggaag
gagtttgtggaagcctacctgcgctacgtgttcttagactcggtgagcgagcagtactca
gccttctcctctggcttcctgaaggtgtgcgggggggatatcctgtcgctgttccagccc
tctgagctgatggccatggtggttggcaacaacaactacaactgggaggagatggaaaag
aatgctgtttacaaaggggaatacacagccactcatccaacagtcagattgttctgggag
gttttccacgagttccctctggagaagaaaaagcagttcttattgttcctgaccggcagc
gaccgtatccccatccacggcatggagagcctgcgtatcgtcatccagtccaccacagcg
gaggagcattacctgccggtggcccacacctgctacaacctcctagacatgccccgctac
cagaccaaagagatcctgtgtcgccgtctcactcgagctgtggagcagtacgagggcttc
agtctggtctaa
DBGET
integrated database retrieval system
