Etheostoma cragini (Arkansas darter): 117961266
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Entry
117961266 CDS
T07493
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117961266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117961266
03036 Chromosome and associated proteins [BR:
ecra03036
]
117961266
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117961266
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
117961266
Chromatin remodeling factors
BAF complex
117961266
PBAF complex
117961266
GBAF(ncBAF) complex
117961266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
117961266
NCBI-ProteinID:
XP_034755708
LinkDB
All DBs
Position
2:17787436..17807583
Genome browser
AA seq
1673 aa
AA seq
DB search
MSTPDPPMGGTPRPGPPSPGAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQPGPSGYSQD
NMHPPHKPMDSMHEKGMSEESRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHSPLGGS
DHSSPVPSNGPPSGPLMPSSSSSSSSGGPGSAPTPLDGPGGDQHTLGPNNRPGPPGSSGP
GPSPGPSLGPSLSTLASGLESGVPPCPGGPGGPTPFNQNQLHQLRAQIMAYKMLARGQPL
PDHLQMAVQGKRPMPGMQQQQSMSSLAPGSGGGPVGGPIGPVPVPGPMGSGYSRAHGMMG
PNMPPPGPSGTPAGMQGQNPNGPPKCWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAPPS
VPPAASPVMPPQTQSPGQPTQPTPMMPYHAKQNRITPIQKPCGLDPVEILQEREFRLQAR
ITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALDAK
AYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKM
QKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQT
DEYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAEGPTPVMGPDGEPLDETSQMSDLP
VKVIHVDSGNILTGLDAPRAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEEPQPS
ATQVEEKKKITDPDCEDVSEVDVRHIIENAKQDVDDEYIGAAFARGLQSYYSVAHAVTEK
VEKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMENKR
LNGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRTGKFNVLLTTYE
YIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPEL
WALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLK
KEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQ
LRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATNHKVLL
FCQMTSLMTIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGL
GLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTINSVEEKILAAAKYK
LNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRINEEDEVPDDETVN
QMIARSEEEFDQFMRMDLDRRREDARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEE
EKMFGRGSRQRKEVDYSDSLTEKQWLKSVFPVQAIEEGTLEEIEEEVRHKKTTRKRKRDR
DPDLPGPSSSSGGRGRGDKDEDGKRQRKRGRPPAEKLSPNPPALTKKMKKIVDAVIKYKD
SASGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRGHRYRSLGDLERDVMLLFQ
NAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEESEGEESEEEEDELEEGSETESRSVK
VKIRLGRKDKGGDRGKVRSRRSGRSRAKPVVSDDDSEDEQEEERSPSATDEES
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaccagatccccccatgggaggcacccctcgcccaggtcctccctcccctggg
gcgatgctgggccccagcccagggccctccccaggctcctctcacagcatgatgggcccc
agccctggccctccatcctcgggccactcccagccagggccctctggatacagccaggac
aacatgcaccctccgcacaaacccatggacagcatgcatgagaaaggcatgagtgaggag
agccgcttcagccagatgaagggactatcaatgagacagggcgggcacagtggtatgggc
cccccacccagtcctctagaccaacactcgcaaggataccattctccattagggggctct
gaccactccagccctgtcccttcgaatggtcccccctctggaccgcttatgccatcgtcc
tcttcctcctcctcctctggtggtcccggctctgcccctacacctttagatggccccggt
ggagatcaacacactcttggtcccaataaccggcctggccctccaggtagctccggccca
ggccccagccctggacccagccttggccccagtctctccacccttgcatctggccttgaa
tctggagtacctccatgccctggaggtcctggtggccctactccctttaaccagaaccag
cttcaccaactcagagcccagatcatggcttataagatgctggcccgtgggcagccattg
ccagaccacctccaaatggctgtccaagggaagaggcccatgccggggatgcagcagcag
cagtccatgtccagtttggctcctggatctggaggcgggccagtaggtggaccaatagga
ccagtaccagtgcctgggccaatgggttcaggctacagtcgagctcatggaatgatgggt
cccaacatgcctcctccaggcccatcgggcactccagctgggatgcagggacaaaaccca
aatggacctcccaagtgctggccagaaggccccatggtgaatgcagcagccccctccaac
gcaccccagaagcttatcccccctcagcccactggtcgaccctctcctgccccaccttca
gttcccccagctgcctccccagtaatgcctccccagactcagtcccccggccagccgaca
cagcctactcccatgatgccttaccatgccaagcagaaccgcataacccccattcagaaa
ccctgtggactcgacccagtggagatactgcaggagagggagttcaggttacaggctcgt
atcactcatcgtattgctgagctggagaacttgccgggctctctggctggggatttacgt
accaaagctactatagagctcaaagccctccgactgctaaacttccagagacagctgcgt
caagaggttgtggtgtgtatgcgtcgtgacacagcgctagagactgccctcgatgccaag
gcctacaagcgaagcaagcgtcagtctctgcgagaggcgcgcatcaccgagaaactggag
aaacagcagaagattgagcaagaacgcaaacgccggcagaaacatcaggagtacctcaac
agcatcctgcaacacgccaaagactttaaagagtaccaccgctccatcacaggcaaaatg
cagaaactgacaaaagctgtggccacctaccatgccaatactgaacgggagcagaaaaaa
gagaatgagcgcattgagaaagagaggatgaggaggctcatggctgaggatgaggagggc
tatcgtaaactgattgaccaaaagaaggataagcgcctggcctacctgctgcaacaaact
gacgagtatgtcgccaacctcaccgagctggtcagagctcacaaagctgcgcaggccctc
aaggagaaaaagaagaagaagaagaagaagaaaaaattggagaatgcagagggtcctact
cctgtcatgggtcctgatggcgagcctctcgatgagacaagccagatgagtgacctgcct
gtgaaagtcatccacgttgacagtgggaacatcctgacaggactggacgctccaagagct
ggacagctagagacctggctggagatgaaccctggttatgaggtggctcctcgctcagac
agtgaagacagcgaggaggaggaagaggaggaggaggaagaggaggagcctcagccgtcg
gctactcaggtggaggaaaagaagaagattacagaccccgactgtgaagatgtgtcagag
gtggacgtccgacacatcatcgaaaatgctaaacaggacgtggatgatgaatatatcggt
gcagcgttcgcccgaggcctccagtcttattattctgtggctcacgctgttacagaaaag
gtggagaaacagtccagtttgctaataaatggacaactcaagcagtatcagattaaaggt
ctggagtggctggtttccctctacaataataatctgaatgggatcctggcagatgagatg
ggtctgggaaaaaccattcagactatcgccctcatcacatacctcatggagaacaaacgg
cttaatggtccctacctcatcattgtacccctctcaactctttctaactgggtgtatgag
tttgacaagtgggcaccaacagttgtcaaagtgtcctacaaggggtctcctgctgccagg
agagcctttgtcccccagctgcgcactggcaagtttaatgttttactcaccacttacgag
tacatcatcaaggataaacaagtactggccaagattcgttggaaatacatgattgtggat
gagggccaccgtatgaagaaccaccactgtaagctgacccaggtcctaaacactcactac
ctggccccacgacgagtcctgctgacaggaacgccgcttcagaacaaactacctgagctc
tgggcgttgttaaacttcctcctgcccaccatcttcaagagttgcagcacctttgagcag
tggttcaacgcccctttcgctatgactggagagaaggtggaccttaatgaagaggagacc
atcttgataatccgtcgtctccacaaagtacttcgtcccttcctgttacgcagattaaag
aaggaagtggaggcacagcttccagagaaggtggaatatgtgatcaagtgtgacatgtca
tctcttcagagggtgctgtacaggcacatgcaggccaagggggtcctgctcactgatgga
tcagagaaggacaagaagggtaaaggtggcacaaagacactgatgaacaccatcatgcag
ctgaggaagatctgtaaccacccatacatgttccagcagatagaggaatctttctctgaa
catttaggattctctggtgggatagtccagggtccagacctgtatcgggcatcaggaaag
tttgaggtgttggatcgaatcctgccaaagctgagagccacaaaccacaaagtactgctc
ttctgtcagatgacctcactcatgaccatcatggaggactactttgcctatcgcagcttc
aagtatctgcgtctggatggcactacgaaagctgaagatagaggaatgttgctgaaaaca
ttcaatgaaccaggatcagagtactttatcttcctcctgagcacaagagctggaggcctc
ggcctaaatttgcagtctgccgacactgtggttatttttgactctgactggaacccacat
caggacctgcaggctcaggacagagcccaccgtatcggtcaacagaacgaggtgcgtgtg
ctgcgtctttgcacaatcaacagtgttgaagagaaaattctggctgctgccaagtacaaa
cttaacgtggaccaaaaggtcatacaggctggcatgtttgatcagaagtcttccagccac
gagcgcagggccttcctgcaggccatcctggaacacgaggagcaggacgaggtctggggt
caggaagtctgtctacgcattaatgaggaggatgaggtgccagatgatgagacggtcaat
cagatgattgccaggagtgaggaagagtttgatcagttcatgcgtatggatctagacagg
cgtcgcgaggatgcccgtaacccacggcgaaaacctcgtctgatggaggaggacgagctg
cccacatggatcatgaaggatgacgctgaggtcgaacggctgacctgcgaggaggaagaa
gagaaaatgtttggacgaggttcacgacagcggaaggaggtggattacagcgattcgctg
acggagaagcagtggctcaagtctgtgtttcccgtgcaggcgatagaggagggtacacta
gaggagatcgaggaagaggtacgtcacaaaaagacgacccgcaagaggaagcgtgaccgc
gacccggatctccctggtccctcctcttcctctgggggaagaggtcgaggggacaaagat
gaagatgggaagaggcagaggaagagggggcgaccacctgctgagaaactctcccccaac
ccccctgccctcacaaagaagatgaagaagattgtggacgctgtcatcaagtataaagac
agcgccagtgggcgtcagctaagcgaggtgttcatccagctgccatctcgaaaagagctg
ccagagtactacgaattgatccgcaagcctgtggacttcaggaagatcaaggagaggatt
cgaggtcatcgttatcgcagtctgggtgacctggagagagacgtcatgctgctcttccaa
aacgctcagacctttaacctggagggatcactgatatatgaagactccatcgtcctccag
tcagtgtttaccagcttgaggcaaaagattgagaaggaggaggaaagtgaaggagaggag
agtgaggaagaggaagacgagctggaggaaggatcagagactgaatctcgctcagtgaaa
gtgaagatccgtctgggcaggaaggataaaggtggagatcgagggaaggttcgcagcaga
cgatcaggacgcagtagagccaaacctgttgttagtgatgacgactctgaggatgagcag
gaagaggagcgttcccccagtgccactgacgaggagtcctga
DBGET
integrated database retrieval system
