Etheostoma cragini (Arkansas darter): 117961284
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Entry
117961284 CDS
T07493
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117961284 (stxbp5a)
Membrane trafficking [BR:
ecra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117961284 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117961284 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_Prp19
WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
CFAP43_N
Beta-prop_Vps41
Synaptobrevin
Beta-prop_VPS8
WD40_like
Motif
Other DBs
NCBI-GeneID:
117961284
NCBI-ProteinID:
XP_034755729
LinkDB
All DBs
Position
18:9641306..9735020
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AA seq
1143 aa
AA seq
DB search
MKKFNIRKVLDGLKEVSSSTPSVQVGPQENHLIQETLQSDHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIHLQFLINEGALVSALADDSVHL
WNLRQKRPAILHSLKFSRERITFCHLPFQSKWLYIGTERGNIHLVNVESFMLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFEAGIVVLWDLKSKKADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNIRGQGKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
IGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYSNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKSSTEVSDEDPFAIQIMAWCPDSRMLCVAGVSANVIIYRFSKLEVTTEVVQLLE
VRMQYELNDIESPDGGGGGGEQTSALPTPGASPQTSGPPSHPSTSSNNSDGGNMPCLKVR
STPLKQSAGYQVDLVVQLVWVSGEPPQQITSLALNSSYGLVVFGNSNGLAVVDYVQKTVV
LNLGTVELYGSNDPYQRQPRSPRKSRQPSGGLCDINEGSATSEDRCKSPTSVLMSNSNLP
QFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDK
ETRESISSFHFSDTFARKGDSTLTPCLYVGTTLGTVLSLALTLPPAGEQRQLQPVIISPT
GILVRLTGSVMRMAFLDSTGSMLPPPFEPWFEPNVTADGEEREKVRKRRPVSVSPSTSQD
LNESQYAVVCSEKQAKVISLPSQTCIYKHSITETSFILRADVVQMSQGVSLACFCANGHI
MTLSVPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEIQRITYSQDTCENLQE
MLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGEVSAGKASRSLAQHIPGPGGIE
GMKGAASGIVGDLARARIALDERGQKLGELDERTAAMMASADSFSKHAHEMMLKCKDKKW
YQF
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcagaaaggtgctggacggtttgaaagaggtttcctcctccacc
ccgtctgtccaagtggggccacaggagaaccatctgatccaggagaccctccagtccgac
catttccagctctgcaagaccgtccgtcatggcttcccctaccagccatcgtccatggct
tttgaccccgtgcagaagatactggccattggcacccagagtggagctctcagattgttt
ggtcgtccaggcgtggagtgttactgtcagcacgagagcggagcagccgtcatccatcta
cagtttctcatcaatgagggagcgctggtgagtgctctggctgacgacagtgtccacctg
tggaacctgagacagaagagaccagccatcctccactccctcaagttcagcagagagaga
ataactttctgccacctgcccttccagagtaaatggttgtacatcggcacagaacgaggg
aacatccacctcgtcaacgtggagtcctttatgctctcaggctacgtcatcatgtggaac
aaagccattgaactgtcctccaaggctcaccctggaccagttgtccacataagtgataac
cccatggatgaaggaaagcttataattggatttgaggctgggatcgtggtcctgtgggat
ctgaaatcaaagaaggccgactatcgctacacttacgatgaggcaatccactccgttgcc
tggcatcacgagggcaagcagttcatttgcagtcactcagatggaactctgaccatatgg
aacatcagaggccagggcaagcccatacagacaatcaccccacacggaaaacagcccaag
gacgggaagaagccagagccttgcaaaccaatcctcaaagtggagtacaaaaccactaga
attggggagccctttataatcctgtctgggggtctgtcctacgacacggtgggccggcgg
ccttgtttgacggtaatgcacgggaaaagtaccgctgtgctggagatggactatcctata
gtagacttccttacactctgtgagacaccatactctaatgattttcaggaaccttacgct
gtggtggtccttctagaaaaggatttagtggtgatcgaccttgcacaaaatggttaccct
atattcgagaacccctatcctctgactatccacgagtctcctgtgacctgctgcgagtac
tttgccgactgccctgtggacctcatacctgcactttactctgttggctcgcggcagaaa
cgacagggctacagcaagaaggaatggcctattagtggcggaaactggggtcaaggcaca
cagagctacccagagatcatcatcactgggcatgctgatggaactgtgaagttctgggat
gcctctgcaataatgctccaagtgctctataagctcaaaacagccaaggtgtttgacaga
aaccggtccaaggaggacaagagcagcaccgaagtgtcagatgaagacccctttgccatt
cagatcatggcctggtgccctgacagccggatgctgtgtgtggccggggtgtcagccaat
gtcatcatctaccgcttcagcaaactggaagtaactactgaggtggtgcagttacttgag
gtgcgaatgcagtacgagctgaacgacatagagtctccagacggcgggggtggagggggc
gaacagacatcagcgcttcccacccccggtgcctcacctcagacaagcggcccaccttca
cacccctccacgagcagcaacaactctgatggaggcaacatgccgtgcctcaaagtgcgc
agtactcctctgaagcagtctgcaggttaccaggtagatttggtggtccagttagtgtgg
gtgagcggagagcctccgcagcagatcacaagtctggctctcaattcctcctacggcctt
gtggtgtttggcaacagtaacggtctggctgtggtggactatgtccagaagacggtagtg
ctcaatttggggacggtcgagctttatggctccaacgatccctaccagagacagccccgc
tcgccaagaaagtcacgacagccttctggaggtctgtgcgacattaacgagggctcagcc
acatcagaggaccgctgcaagtcccctacttcagtgttgatgtcaaacagcaatctaccg
caattctacaatggaggtggtagaggagcaaagatgtcacggaaattaagcttgcctact
gagctaaagccagacttggtcctcctgtctgtatgcccgccgcggggtgccaacccatta
gaccacagggacaattctttcagccgctcgcgctcctccagcgtcaccagcatcgacaag
gaaacacgagagtccatcagttccttccactttagtgacacctttgcccggaagggggac
agcactttgacaccctgcctgtatgtgggcactactttgggcaccgtgctgtctctagct
ctcacattaccacctgctggggagcaacggcaactgcagccagttatcatttcacctaca
ggcattttagtgcggctgacgggcagcgtcatgcggatggctttcctggactcaacaggt
tccatgctgccccctccgtttgagccctggtttgagcccaacgttacagcggatggtgaa
gaaagagagaaagtccgtaagcgccggcctgtctcggtgtctccttctacctcccaggac
ctcaacgagagtcagtatgctgtggtgtgttccgagaaacaggccaaagtcatttccctc
ccctcccagacctgcatctataaacacagtatcacagagacttccttcatcctaagggca
gatgtggtgcagatgagccaaggcgtgtctctggcttgtttctgtgccaacggccacatt
atgaccctcagtgtgccaggactgagaccgctcatggatgtaaactacctgcctttgaca
gacatgcggatagcaaggacgttctgcttcaccaacctgggtcaggccatgtacctctgc
tcccccactgagatccagaggattacttacagccaggacacctgtgaaaacctacaggag
atgctgggtgaactttttacaccagtggagacaccagaggcacccaacagagggttcttc
aaaggcctctttgggggaggagcacagtcgctggacagggaggagctatttggtgaggtg
tcagctgggaaggcatcacgaagtctggcccagcacatcccaggcccgggtggcattgag
ggcatgaaaggggcagcgtctggtatagttggagatctggcacgcgcccggatagcactg
gatgaaagaggccagaaactgggcgagctggatgagaggacagctgccatgatggccagc
gcagactccttttccaaacacgcccacgagatgatgctgaagtgcaaagataaaaaatgg
taccagttctga
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integrated database retrieval system
