Etheostoma cragini (Arkansas darter): 117961577
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Entry
117961577 CDS
T07493
Name
(RefSeq) syndecan-3-like isoform X1
KO
K16338
syndecan 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04512
ECM-receptor interaction
ecra04514
Cell adhesion molecule (CAM) interaction
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117961577
04514 Cell adhesion molecule (CAM) interaction
117961577
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117961577
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ecra00535
]
117961577
Proteoglycans [BR:
ecra00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
117961577
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
117961577
NCBI-ProteinID:
XP_034756261
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All DBs
Position
18:complement(7701324..7704776)
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AA seq
167 aa
AA seq
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MGISVSFLFLALGLLHPIHMSFPVLPGDLEGSGYDLDISGSGDWSQQGEMENIEYNPNSE
DVRTFAGNAGGGTKTTLHDSSVLNFDGAHKDSGSGFVFVANSKGFLENKEVFTAVIAGGV
TGVALAAALAALLIYKWQKKDNGGYILGQQRASDEDYHRPDREHVVV
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggggatatctgtatcttttttgtttttagctttgggattattacatcctatccatatg
tcgtttcctgtccttcctggagacttggagggatcaggatatgacctggatatttctggc
tctggggattggtcacaacaaggtgaaatggaaaacattgagtacaaccccaacagcgaa
gatgtccgaacgtttgcaggaaacgcaggaggtggaaccaagactacactccatgattct
tcagtcctgaattttgacggtgcacacaaagacagcggatcaggatttgtttttgtggca
aacagcaagggtttcttggagaacaaagaagtttttactgctgttattgcaggaggagta
acaggagtggcacttgcagctgcactggcagcactattaatctacaaatggcagaagaaa
gataatggaggatatattctgggccagcagcgggcttcagacgaagattatcacagacca
gacagggaacacgttgttgtttaa
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