Etheostoma cragini (Arkansas darter): 117961652
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Entry
117961652 CDS
T07493
Symbol
lft1
Name
(RefSeq) lefty1
KO
K04668
left-right determination factor
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117961652 (lft1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ecra04052
]
117961652 (lft1)
Cytokines and neuropeptides [BR:
ecra04052
]
Cytokines
Transforming growth factors (RSTK binding)
117961652 (lft1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
DUF5422
Motif
Other DBs
NCBI-GeneID:
117961652
NCBI-ProteinID:
XP_034756357
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Position
18:18987386..18989964
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AA seq
358 aa
AA seq
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MDFLRACVLCTALFGLAEAFTHQDMKDALLQKLGLDEVPKIHKRDLENLVIPAHIKNKYM
SMLKMHHSRRRRSLPSLAGILRGIPGNADISGEYVYSDTTRHRMVFDMEARVPDNSEVTM
AELKLYQRTSYQKRFAVERKNHRPVNNARVSIYWVEVQPNGSNRTSLVDSRLIPIHETGW
KSFDVTQAVHYWSKSQQKTPMHLEVWIEGERPGSYAAEMAKSVRFTTQEQTDNTLGKPEL
ILYTLNLEEYGSRGDCDLHQNKDACCREQYFINFRALTWTQYWIIEPAGYQAFRCTGGCK
QPKRNYGYGERRCTVSESAPLPIMYLVKKGDYTEIEVAEFPNMIVERCACTMDNVSIV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctgcgcgcttgtgtcctttgcaccgctctcttcggcctcgccgaggctttt
acgcaccaggatatgaaggacgcgctgctgcagaaacttggcttggatgaagttcctaag
atccataaaagggatttggagaatctggttatcccggcgcatatcaaaaataagtacatg
tccatgctgaagatgcaccacagcaggagacgcagatctctgcccagcctggccggcatc
ctgaggggaatccctggcaatgcagatatttcaggggagtatgtgtattctgacaccact
cggcatcgcatggtgttcgacatggaggcgagggttccggataacagcgaggtgaccatg
gcggagttgaagctctaccagcggacttcctatcagaagcgcttcgcggtggagaggaag
aaccaccggcccgtcaacaacgcccgggtcagcatctactgggtggaggtgcagccaaac
ggatccaaccgcacatcactggtagactcacggttgatacccattcacgagaccggttgg
aagagctttgatgtgacccaggcggtgcactattggtccaagagccagcagaagacacct
atgcacctggaggtgtggatcgagggcgagagacctggcagctacgcggccgagatggcc
aagagtgtccgctttaccacccaggagcagacggacaacaccttgggaaagcccgagctc
atcctctacacacttaacctcgaagaatacggttctcgcggcgactgcgacctccaccag
aacaaagacgcctgctgcagggaacagtacttcatcaacttccgggctctcacctggacg
cagtactggatcatcgagccggcagggtaccaggcgttcaggtgcaccggcggctgcaag
cagcccaagcggaactatgggtacggggagaggcggtgcacggtgtccgagagcgccccg
ttacccatcatgtacctggtgaagaagggggactacactgagatagaagtggctgaattc
cccaatatgattgtcgaaaggtgtgcatgcaccatggacaacgtctccatagtatga
DBGET
integrated database retrieval system