Etheostoma cragini (Arkansas darter): 117961699
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Entry
117961699 CDS
T07493
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117961699 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117961699 (capn3b)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
117961699 (capn3b)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C2: calpain family
117961699 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
117961699
NCBI-ProteinID:
XP_034756453
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All DBs
Position
18:7581409..7596833
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AA seq
769 aa
AA seq
DB search
MGDEKYKVPLVEETKVRVLYESEAAFGPDDKADYPSAGTNSIYSAILSRNEAVKDATRLK
TFLELRDKYVKKKVLFEDPMFPADDSSLFYSHKPSMKIEWKRPTEICENPQFIIDGANRT
DICQGELGDCWLLAAIACLTVNEKLLYRVIPPDQSFTDNYAGIFHFQFWRYGEWIDVVVD
DRIPTCNNQLVFTKSFRKNEFWSALLEKAYAKLNGSYEALKGGNTLEAMEDFTGGVTEFF
ELSEAPKDLYNIMRKALERGSLMGCSIDILSASEMETRTEQGLVRGHAYSIIGLAECDEV
AKDARIRLIRLRNPWGFVLWKGPWSANSKEWSTISTADKDNLKKQTVEESEFWMSFDDFQ
RNFTKLEMCNLTPDTLQGDERHSWTVSVNEGRWVRGSSAGGCRNFPHTFWTNPQYRLKLD
EEDDDPEDGQATCTVVVALMQKGRRMQRHQGAIFLTIGFSIYEVPKEMCGKDLHLQKDFF
LYTASKAKCKTYINLREVTERFQLPPGEYVIIPTTFEAHQEGEFILRVFSEKQNMFEEAE
NTIGSDQMQQDKKKKEKPIVFVSDRARANKEIQHDGIQGEKRKKPKQKLLQPEEETEEEK
QFRAIYQKIAGEDMQICANELKMIMKNVLAKHSEIKTEGFSLETCRSMIALMDTDGTGKL
NLQEFKHLWKKIKEWQRIFKRYDKDKSSSISSFEMRNAVNDAGFQLNRQLYDIIAMRYAD
EHLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGLIKLNVLEWLQLTMYS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgagaaatataaagtgcctcttgttgaggaaacaaaggtgagggtgctttat
gaaagtgaagcagcatttgggcccgatgacaaagctgattacccttctgctgggaccaac
tccatctactcagcaatcttaagcagaaatgaggctgtcaaggatgccacgcgtcttaag
acctttttggaattgcgagacaaatatgtaaagaagaaggtgttgtttgaagaccccatg
ttccctgcagatgactcctcactcttctacagtcacaaaccttccatgaagattgagtgg
aaacgtcccacggaaatttgtgaaaacccccagttcatcatagatggagccaacaggaca
gacatctgtcagggagaattgggtgactgctggctgctggctgcgatcgcctgtttgaca
gtgaatgagaaactgctgtacagagtgattcctccggaccagagcttcactgacaactac
gcaggcatcttccatttccagttctggcgttatggggaatggatcgatgtggttgtggac
gaccgcatccccacctgcaacaaccagctggtgttcaccaaatctttcagaaagaatgaa
ttctggagtgctcttctggaaaaagcttatgccaagttgaacgggtcttatgaggcactt
aaagggggcaacactttggaagccatggaggatttcacaggaggagttaccgaattcttt
gagttgtcagaggcgcccaaggacctctataacatcatgaggaaagcgctggagagaggc
tctctaatgggctgctccatagatattctttcagcctctgaaatggagactcggactgaa
caggggctggtcaggggtcatgcctactccatcataggcctggcagagtgcgacgaggtt
gcaaaggacgccagaattcgtctgattcgcttgcgaaatccctggggttttgtgctgtgg
aaaggaccatggagtgcaaattcaaaggaatggtcaactatttccacagcagacaaggac
aacctaaaaaaacagaccgtagaggagagtgagttctggatgtcttttgatgatttccag
agaaacttcacaaagttggagatgtgtaacttgacccccgacaccctgcagggtgatgaa
aggcacagttggacagtgtcagtcaatgagggtcgctgggtgagaggcagctctgctggc
ggctgcaggaacttcccacacacattctggacaaacccacagtatcggctaaaactggac
gaggaggatgacgacccagaggacgggcaggcaacctgcactgtggtggtggctctgatg
cagaaagggcgaagaatgcagcgccatcaaggggccatattcctcaccatcggattttcc
atctacgaggtgccgaaggagatgtgcggcaaggatctacacttgcagaaagacttcttc
ctgtacacagcctccaaagctaaatgtaagacctacattaatctgcgggaggtgacggag
cgtttccagctgcctccaggagagtatgtcatcatcccaacaacctttgaagcccatcaa
gaaggagagttcattctcagggtcttctctgagaagcagaacatgtttgaggaggcggag
aacacaattggatctgaccaaatgcagcaagacaagaaaaagaaagaaaagcctattgta
tttgtgtcagacagagcacgagccaacaaagaaatccagcatgacggcattcagggggaa
aagagaaagaaaccaaagcaaaaactactccagcctgaggaggagactgaagaggaaaaa
cagttcagagccatttatcaaaagattgctggtgaggatatgcagatctgtgccaacgaa
ctcaagatgatcatgaagaacgtgcttgccaaacatagtgaaataaagacagagggtttc
agccttgagacatgtcggagtatgatcgccttgatggatactgatgggacaggaaagctg
aacctacaggagttcaaacacttgtggaaaaagataaaggagtggcagcggatcttcaaa
cgatacgataaagacaaatccagctccatcagcagttttgagatgaggaacgctgttaat
gatgcagggtttcaactcaacagacagttgtatgacatcatagccatgcgctacgcagac
gaacacctaaacatcgattttgacagttatatctgctgttttgtgagactagagggcatg
ttcagagctttcaatgcctttgacaaagatggagatggactaatcaagctcaatgtcctg
gagtggcttcagctgaccatgtattcgtaa
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