KEGG   Etheostoma cragini (Arkansas darter): 117961777
Entry
117961777         CDS       T07493                                 
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43 isoform X1
  KO
K14305  nuclear pore complex protein Nup43
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117961777 (nup43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecra03019]
    117961777 (nup43)
   03036 Chromosome and associated proteins [BR:ecra03036]
    117961777 (nup43)
Messenger RNA biogenesis [BR:ecra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     117961777 (nup43)
Chromosome and associated proteins [BR:ecra03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    117961777 (nup43)
SSDB
Motif
Pfam: WDR55 WD40_Prp19 Beta-prop_EML WD40_CDC20-Fz WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_WDR75_1st WD_LRWD1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st EIF3I KNTC1_N Vgb_lyase Beta-prop_WDR75_2nd Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 117961777
NCBI-ProteinID: XP_034756597
LinkDB
Position
18:complement(4334403..4339643)
AA seq 377 aa
MESVNAKYVSQKVSKTRWRPVSHSSLQQPDIFATGSWDNEVGKTTDNKISFWSIGNHGRS
DMDDGFEGDPQLLCEHKHDGDVLDLQFLDQERIVTTSSTGAVTIFRHHHNSQTVSVSQRW
PRVHRYPCDNAPCTGVVCSSPEIVTVGEDGKIIVFRADQEGVIRVIENADSSTIHAVTYL
RTTEILTVNSIGQLKLWDLRQQSNSPSQILSLSGDRLPLHCVDRHPNQQHIVATGGQDGM
LCVWDVRQGSTPFSLMEAHTAEMWEVHFHPTNPDHLFTCSEDGSLLHWETSTPSDMPSFL
QGGRNNSMISRSAMAPAGGNQSLISTWLSADSSKGRLETTHMLPSQTLSVNSLDVLGQCL
VCGTDGEAIFVNRQVPV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggagagtgtaaatgccaagtacgtgtcccagaaagtcagtaaaaccagatggcgccct
gtatcgcattcgtctttgcagcaaccggatatctttgcgaccggctcgtgggataacgag
gttggcaagacaactgataacaagatttccttttggtccattgggaaccatggaagatca
gacatggacgatggatttgaaggagacccacagcttttatgtgaacacaagcatgatgga
gatgttctggaccttcaatttttggaccaagaaagaattgtcacaacatcgtcaactgga
gcagtcaccatcttccgccatcaccacaacagtcagacagtatcagtttctcagcgctgg
ccgagagtgcatcgttacccatgtgacaacgctccctgcaccggtgttgtgtgcagcagt
cccgagattgttacagttggggaagacggcaagattatcgtcttcagggccgatcaggaa
ggagtgattcgagtcatagagaatgcggacagcagcacgattcatgctgtgacttacctg
aggacaacagagattttgacagtgaactctatcggccaactcaaactgtgggacttaaga
caacagagcaactcaccatcccagattctctccttgtccggggacagactccctctgcac
tgtgtggacagacatccgaaccaacagcacattgttgccacaggagggcaggacggcatg
ctctgtgtctgggatgtgagacaaggcagcacgcccttctcactcatggaggcacacact
gctgaaatgtgggaagtccacttccacccgaccaacccagatcacctgttcacatgctca
gaggatggttcactgctgcactgggagacttctacaccgtcagacatgccctccttctta
caaggcggcaggaacaacagcatgatatctcgcagtgcgatggccccggctggagggaac
cagtctctcatcagcacctggctcagcgcagactccagtaaaggccgcctggaaacgacc
cacatgctgcccagccagacgctgtctgtcaacagcttggatgtacttggacagtgtctt
gtctgtgggactgacggagaggccatttttgtcaacagacaggtcccagtttga

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