Etheostoma cragini (Arkansas darter): 117961777
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Entry
117961777 CDS
T07493
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43 isoform X1
KO
K14305
nuclear pore complex protein Nup43
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117961777 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117961777 (nup43)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117961777 (nup43)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117961777 (nup43)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117961777 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
Beta-prop_EML
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD_LRWD1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
EIF3I
KNTC1_N
Vgb_lyase
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
117961777
NCBI-ProteinID:
XP_034756597
LinkDB
All DBs
Position
18:complement(4334403..4339643)
Genome browser
AA seq
377 aa
AA seq
DB search
MESVNAKYVSQKVSKTRWRPVSHSSLQQPDIFATGSWDNEVGKTTDNKISFWSIGNHGRS
DMDDGFEGDPQLLCEHKHDGDVLDLQFLDQERIVTTSSTGAVTIFRHHHNSQTVSVSQRW
PRVHRYPCDNAPCTGVVCSSPEIVTVGEDGKIIVFRADQEGVIRVIENADSSTIHAVTYL
RTTEILTVNSIGQLKLWDLRQQSNSPSQILSLSGDRLPLHCVDRHPNQQHIVATGGQDGM
LCVWDVRQGSTPFSLMEAHTAEMWEVHFHPTNPDHLFTCSEDGSLLHWETSTPSDMPSFL
QGGRNNSMISRSAMAPAGGNQSLISTWLSADSSKGRLETTHMLPSQTLSVNSLDVLGQCL
VCGTDGEAIFVNRQVPV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgtaaatgccaagtacgtgtcccagaaagtcagtaaaaccagatggcgccct
gtatcgcattcgtctttgcagcaaccggatatctttgcgaccggctcgtgggataacgag
gttggcaagacaactgataacaagatttccttttggtccattgggaaccatggaagatca
gacatggacgatggatttgaaggagacccacagcttttatgtgaacacaagcatgatgga
gatgttctggaccttcaatttttggaccaagaaagaattgtcacaacatcgtcaactgga
gcagtcaccatcttccgccatcaccacaacagtcagacagtatcagtttctcagcgctgg
ccgagagtgcatcgttacccatgtgacaacgctccctgcaccggtgttgtgtgcagcagt
cccgagattgttacagttggggaagacggcaagattatcgtcttcagggccgatcaggaa
ggagtgattcgagtcatagagaatgcggacagcagcacgattcatgctgtgacttacctg
aggacaacagagattttgacagtgaactctatcggccaactcaaactgtgggacttaaga
caacagagcaactcaccatcccagattctctccttgtccggggacagactccctctgcac
tgtgtggacagacatccgaaccaacagcacattgttgccacaggagggcaggacggcatg
ctctgtgtctgggatgtgagacaaggcagcacgcccttctcactcatggaggcacacact
gctgaaatgtgggaagtccacttccacccgaccaacccagatcacctgttcacatgctca
gaggatggttcactgctgcactgggagacttctacaccgtcagacatgccctccttctta
caaggcggcaggaacaacagcatgatatctcgcagtgcgatggccccggctggagggaac
cagtctctcatcagcacctggctcagcgcagactccagtaaaggccgcctggaaacgacc
cacatgctgcccagccagacgctgtctgtcaacagcttggatgtacttggacagtgtctt
gtctgtgggactgacggagaggccatttttgtcaacagacaggtcccagtttga
DBGET
integrated database retrieval system