Etheostoma cragini (Arkansas darter): 117961913
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Entry
117961913 CDS
T07493
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117961913 (taf1a)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
117961913 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
P34-Arc
Motif
Other DBs
NCBI-GeneID:
117961913
NCBI-ProteinID:
XP_034756829
LinkDB
All DBs
Position
18:7052705..7059536
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AA seq
424 aa
AA seq
DB search
MDDLQRELVPLEDLDDDDSSEGNSSKGSKKSKLPLVNLMCAETKRETGFHQSTRVCLEQI
REALLHHRWQEAAEYMACYPQMLEDPTSGTGQPYKELIWRISTEILHHHPNSKMEDYNNI
YERMKHSGVRHYLMICLEHSFHLLLNGHIEDAKRQLSVAESWRHGKESAAQYQRIKLIHA
YRSLLDYIIWCDKKFTHSNTEYAVSGDNQDMHNYFRQASVNLKEILKSPGIWDPFILSYV
EMLEFYEDHEEALKVLNDYAYDSTFPPNPNAHVYLYQYLRRRDTSERKLMKVLKILHVLV
PSHELMLEYSSLLLQSEKRSNIQKALGVVLEMLDFACWRSNLDVWKRLKSIIQKLQLEDD
WQDVVSGQMAARKDWWPALHFTSFHASKDSEENPELMEVKAPLTKILCPDLMLKYTASQV
TSGE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttgcaaagagagctggtgcctcttgaagacttggatgatgacgattcctcg
gaaggcaactcttcaaaaggatcaaaaaaatcaaagctccctctggtaaatcttatgtgt
gcagagactaaaagggaaactgggtttcaccagagtaccagagtctgtctggagcagatc
agagaagccctgctgcatcacagatggcaagaggcagcagaatatatggcatgttaccca
caaatgttagaagacccaaccagtggcacaggtcagccgtataaggagcttatctggaga
atcagcaccgagatccttcaccatcaccccaactcaaagatggaggactacaacaacatc
tatgaacgaatgaaacactcaggagttagacattacctgatgatctgtctggaacattca
ttccacctgctgcttaatggtcacatcgaggatgcaaagcgtcagctgtctgttgctgaa
agttggaggcatgggaaggagtcagcagctcagtatcagaggataaaactgatccatgcc
tacaggagtttactggattatatcatctggtgtgacaaaaagttcacacactccaacact
gagtatgccgtctctggtgacaaccaagacatgcacaactacttcagacaggcctctgtg
aatctgaaggagattttgaaaagtcctggcatctgggatcctttcatattgagttacgtt
gagatgctggagttctatgaggatcacgaggaggctttgaaagtccttaatgattatgca
tatgacagcactttcccacccaatcccaacgcgcatgtctatctgtaccagtacttaagg
aggcgcgatacttcggagaggaaactgatgaaagtattgaagatcctccatgtactagtc
ccaagccatgagttgatgttggagtatagctctcttctgcttcagtcagagaaaagaagt
aacatccagaaagctttgggagtcgttttggaaatgctggactttgcctgctggaggagc
aacctggacgtgtggaagcggctgaagtccattattcaaaaactacagttagaagacgac
tggcaggatgttgtctctggacaaatggctgcgagaaaagactggtggcctgcgctgcac
ttcacaagcttccacgccagtaaagactccgaggagaacccagagctcatggaagtgaag
gcaccactgacaaaaatcctttgcccggacctaatgctcaagtacacagcctcacaggta
accagcggagagtga
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