Etheostoma cragini (Arkansas darter): 117961971
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Entry
117961971 CDS
T07493
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117961971 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117961971 (rev3l)
Enzymes [BR:
ecra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117961971 (rev3l)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
117961971 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
Motif
Other DBs
NCBI-GeneID:
117961971
NCBI-ProteinID:
XP_034756928
LinkDB
All DBs
Position
18:complement(15273934..15361724)
Genome browser
AA seq
3004 aa
AA seq
DB search
MFAVRIVTADFYLQSPIKDLDVCYSEFRESEVKKVPVVRIFGATPAGQKTCLHLHGVFPY
IYVPYDGNGQQPERYLRQVAFSTDRALNVAMGNPASSVQHVFKVVLVSGMPFYGYHAKEK
HFMKIYLYNPQMVKRVCELLQSGAVMNKSYQPHEGHIPYLLQLFIDYNLYGMNLLNLGAV
KFRRGQHKEDAAAVPHRQTPSSRPSVSPWKSPGTSKLDDSTLGGTFVRWEEETIPCSLVL
DAVEKQSTCELEVDAVAVDVLNRLEIENQIGRNPGLQAIWEDEKQRRREKNQTSQVETPE
SQDRGFVTSTESEKIFMKRFKEILKENEFDVTQGSCVGEKEDQEDLLADMTLHSDPPTPE
GLPCTPANAVEVHRHSQPDSVRSSVKIPEEAVVDEEAILSLLENSQTFLPLSQTSNHSPL
LDSSQDQALNDLLAGLESDGFYRTPVRQNSQSLPGAGSYHCNSDEEEAGPELDKVEAELS
VLMSQRWDNQPPENSPSPRPGLKEPEDCSSDEQQESSEEDMEWCGNNSLFANLSIPQLDG
AADESSDSSLTDSGSRTQSSLIATEKMLGKNNPFSMETVHLEPPLPAKLLLECKHLEHRP
VNVLDTEKPLDMHFQSKSSQDSSTGFKFNKEIPYILPVKHPIPCKLPSHPEVSPVNVDKQ
DIRPMYTYDKKASITLDKTDLESFPFGNGKVTKNGKYSSIKNVETNCLSILQNHRAFSLC
YSELRNCTTKTELELSHKDSKNPILRNISVPSPMVENEFLDPQQEEMGQDSEEGDVGELK
IRYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLSRKKAGSKKLADPCSTLEQAQPRRS
RLKVCKKRLGMAGQRNKLNTVESSASDSQVCTGLTSTTPACPVTSDTEMPALEDKSIEES
APIQDGPLMEGKPITETEPESEERSVNEQTEPLSEPPATTVASFSEGPKVSAEQRLGPLH
DISAKVTCTKPSALPGSKYTLRTKRKMIYDSEDGEYLNVTHSKTTASVKERLKDPTVPSG
QEAKHQKRRKKEPPIIIKYIIINRFKGQKNMLVKMSKVNSEEKLVLLTPDKLQQYNQLAP
LKDFWPKLPESSAVKFPITEPKAKKQPKRKVKVSPTNKKTVGNSAKPRVRQVDRVRRTKG
CQRGPILPSLPPPRPCYCELTNDHDVEYTDVMEELGYLSDRSPSPTHSTPPRCWSPSDPL
MDSMSSEHMINPLSDPCLSSAFHKPHTVSSTKGAQKKRQTAKAKKSIDTKRKVGRSVIKS
REEENPKKEKLRQKSGAAQKQQKKAKDGAEGTISSSTTTVRPRKSRKKKTEEPKSHDSSK
DISQLLFPEDELPPSQSFSQYVPPFQQPASTDGNTNGSSQPASILASNSVDQSIEPKVED
CETSIMEVNQSFSSPVQLKQQGCQTTVVKAEASQEECTAPPPPLAGRPLLKNSKDSQLAA
AFPHSGPKNGDITTLHETPSGLTVLKQLLQKRQLGQALPLQVVGTDSHFTAIAQATVLLD
PTTKPANPKRAPSTAPRKPRAPKSTPKDKKPRIKKGKASSTQPNLSEKQEGKMADDCPLF
LSDPGLDSCNFIEDSLSPELPHNYTFDINAIDQTEFSSPYSGSQFVLTDKNLPVKFLSDV
SQEAVSAPALGFQKKRDRRLDSGEEFQRGSDWHKAGPISPDLFDKPKNGESDSNHLAFLD
SEKIQSREWDFSLGKAHTLSPFQDFHCERKELLFSVFDPVLPLPLSSASFVEHEGSPTGE
LLEGIDGLSSSSSPRSISSLSQVRASQLLRAAGGGAHILKPLMSPPSREEILSTLLDLEM
SEATFQEPFCSNPSDVPGKPMEVGGRKLTVRTRLAKELAEFSGDLSLEGLHFWKTAFSAM
THPAITITSCSQVQGAEASEASKEHQSSAGDKKVILLPCKNPPGRERVQLWLEARKQYDS
LQKGLRSRKSPQRTEQPAASSCPEVKVELAKRLSSIRTQRRKKCNLSLIISPMRNTGSHC
KSTEVSPVSDEGGLDFEQEGGEKHYDDDTTSPESPELPTWQQSCQSSPLGPDRLSENRQN
SPEPLSPRLSDSLERLGEEAGTGPLHLHSTPFLRRRRRSKEDPEPVCSTPISEEDANSQR
LQQRRRSQADPLRRVLLTTQMKNQFAALNVPKKDNSQIEGPSIANSYGFKISMQNLQDAK
ALHEVQYLTLMAMELHARTRRDLEPDPEFDPICALFYCLSSDAPLPDIEGTQLTGAIVVD
KDHQSCDPAGHGVAAPLLVRSGVSGLQVTYAADEKVLFQELIAIMRRFDPDILVGYEVQM
RSWGYLLQRAAVLGVDLCQQLSRVPGDSKENRFAAERDEYGADTMTEINIIGRITLNLWR
VMKTEAALNNYTFENVAFHILHQRFPLYSPRTLSDWFDHNTHLYRWKMVDHYVSRVRGTM
QLLQQHDIIGRTSELARVFGIQFFHVLTRGSQYRVESMMLRVAKPLNYIPVTPSMQQRAQ
QRAPQCIPLVMEPESRFYSNSVVVLDFQSLYPSIVIAYNYCYSTCLGHVDSLGTPDEFKF
GCTSLRVPPELLYQLRNDITVSPNGIAFVKSSVRKGVLPSMLEEILNTRIMVKQSMKTYK
QDKALMRLLDARQLGLKLIANVTFGYTAANYSGRMPSVEVGDSIVHKARETLERAIKLVN
DTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGNEIAEAVTATNPKPIKLKFEKVYLPCV
LQTKKRYVGYMYESLDQKEPVFDAKGIETVRRDNCPAVSKILQRSIKLLFETRDISQVKQ
FVQHQCVKILDGRASMQDLTFAKEYRGSTSYRPGACVPALELTRRMMAHDRRLEPRVGER
VPYVIVYGMPGVPLIQLVRRPMEVLQDPGLRINATYYITKQILPPLARMFQLIGVDVFSW
YQELPRIQKASCSSAVGAEEVGRKGTISQYFTTLHCPVCDELTQLGVCSQCRAEPQRVAV
TLNQDMRQWESQQDQLLKICRNCSGCAERQVSCVSLDCPTLYKLSQVNRQLSKAPYLRQL
LEQF
NT seq
9015 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgtgcgaatcgtcaccgcagacttctatttgcaaagtcccattaaagacctg
gacgtctgctattctgaattcagggagagcgaggtgaagaaagtgccggtggttcggatc
tttggagcaacacctgcaggccagaagacatgcctccacctccatggcgtgttcccctac
atctacgtaccatacgatggcaacggccaacagccggagcgctacctgcggcaggtggcc
ttcagtaccgacagggccctcaacgttgccatgggaaaccccgcctccagcgtccagcat
gtcttcaaggtggtgctggtctctggcatgccgttctatggctaccacgctaaggagaag
cactttatgaagatctacctgtacaatcctcagatggtcaaaagggtctgtgagctgtta
caaagcggagcagtgatgaacaaaagttaccagccccacgagggccacatcccctacctg
ctgcagctcttcatagactacaatctgtacggcatgaacctgctgaacttgggggctgtc
aagttccgcaggggccagcacaaagaagacgcagcagcggttccacaccggcaaacaccc
agcagtcgtcccagcgtcagcccctggaagagccccggcacctccaagcttgacgacagc
accctggggggcacgtttgtccgctgggaggaggagaccataccgtgctccctggtcctg
gatgcggtagagaagcagagcacctgtgagctggaggtcgatgccgtggctgtcgacgtc
ctcaaccgcctggaaatcgaaaatcagatcggcagaaacccgggcctgcaggccatctgg
gaggacgagaagcagaggaggagagagaagaaccagacctcccaggtagaaacccccgag
tcacaagatcgggggtttgtcacttcaacggaaagcgagaaaatcttcatgaagagattc
aaggagattctgaaggagaacgagtttgacgtgacacaaggttcgtgtgttggcgagaag
gaggaccaagaggatcttctcgctgatatgacgctccattctgaccccccgacccccgag
ggactgccgtgtacacccgctaatgctgtggaggtgcacaggcactcgcagccagactcg
gtgaggagcagtgttaaaatcccagaggaggctgtcgttgatgaggaggccatcctgagt
cttctggaaaacagtcagaccttcctcccgctctcccagacatccaaccactcgcccctg
ttagacagcagccaagaccaagccctcaatgatttgctggcaggactggagagcgatggt
ttctacaggacccctgtcagacagaactcccagtcacttcctggtgccgggagctaccac
tgcaacagtgatgaggaggaggccgggcccgagctggacaaggtagaggccgagctcagc
gtgctaatgtcacagcggtgggacaaccagcctcctgagaactcgccctcaccaaggcct
ggtttgaaggagcctgaagactgctcaagtgacgagcagcaggagtcctctgaagaagac
atggagtggtgtgggaataactctctgttcgccaacctgtccatcccccagctcgatgga
gccgcagacgagagcagcgattcctccttaacggacagtggctccaggacccagtcttct
ctcatagccacagaaaagatgctcgggaaaaacaaccccttctccatggagacggttcac
ttggagccacctttgccagcgaagctccttcttgagtgcaaacaccttgagcacagacca
gttaatgtgcttgacacagagaaaccacttgacatgcactttcaatcaaaaagcagccag
gacagttcaacagggttcaagtttaataaagaaatcccctacatcctgccagtcaaacat
cccatcccctgcaagttacctagtcaccctgaggtgtctcctgtcaacgtagacaaacaa
gacatacggcccatgtacacctatgacaagaaagcctccataactttggataagacagat
ctagaaagttttccatttggtaacggaaaggtaaccaaaaacgggaagtacagcagcata
aagaatgtggaaacaaactgtctgtccatccttcagaatcacagggccttctctctctgt
tactcagagctgagaaactgtacaactaagacagagctggagctgagccataaggacagt
aaaaaccctatcctgaggaacatctcagtcccgtcacccatggtagagaatgagtttctt
gatcctcagcaggaagaaatgggccaggacagtgaggagggagatgttggtgaacttaaa
atcagatacgaggactatcaggaaaataagaccgagaggacaatagtggcccagcaggaa
gcacattataagttcttccctagtgtcatcctttccaactgcttgagtaggaagaaagct
gggagcaaaaagctggctgatccctgcagcacacttgaacaggcccagcctcgtagatct
aggctaaaagtttgtaaaaagaggttgggaatggcagggcagagaaacaaattaaacaca
gttgaaagctccgcctctgacagccaggtttgcaccggcctcacctcaaccacacctgct
tgtccagtgacatcagacaccgagatgccagctttggaggataagtcaatagaagagtct
gcgccaattcaagatgggccattaatggagggaaagccaatcacggagacggagcctgaa
agtgaggagaggtctgtaaatgaacagaccgaaccactttcagagcccccggccactacc
gttgccagtttttctgaaggacctaaagtctctgcagagcaaaggttaggtccattacac
gatatatcagctaaggtcacctgtactaaaccttcagcactgcctggtagtaaatacacc
ctgaggaccaaacggaagatgatctatgacagcgaggatggggaatacttaaatgtcact
cattctaagacgacagcctccgtcaaagagcgattaaaggaccccactgtccccagtggg
caggaagcaaaacaccagaaacgtcggaagaaggaaccccctatcattattaagtacatt
attattaacaggtttaaaggacagaaaaacatgctggtgaagatgtccaaagtgaattca
gaggagaagttggtgttgctgacgccagacaagctacagcagtacaatcaactagcccct
cttaaggatttctggcccaagttgccagaatccagtgccgtcaagtttcccataactgag
ccaaaggccaaaaaacagcccaaaagaaaggtaaaggtcagccccacaaataagaaaaca
gtcggcaactccgcaaaacctcgggtaagacaggttgatagggtcagaaggactaaaggc
tgtcagagaggcccaattctaccctccttacctccccctcggccatgttactgtgagctt
actaatgaccatgacgttgagtatactgatgtcatggaagagttgggctacctctctgat
agatccccgagccccacacactcaacaccccctcgttgttggtcaccaagtgaccctctg
atggacagtatgagttcagaacacatgataaacccactcagtgacccatgtcttagttct
gcttttcacaagccgcacacagtgtcttcaaccaaaggagcacaaaagaaacgtcaaact
gccaaagcgaagaaatccatagacactaaaaggaaagtaggcaggtctgttattaagtct
cgggaggaagagaatcccaagaaagagaaattaagacaaaagagtggtgctgcccaaaaa
cagcagaaaaaggctaaagatggagctgaaggcaccatcagcagttctacaaccaccgta
agacctcgaaagtctcgcaaaaaaaagactgaggaacccaaaagccatgactcaagtaaa
gacatctcccagctccttttcccagaggatgagttacctccttcccagagtttctctcaa
tacgtccctccatttcagcagccagcgagcacagatggcaacaccaatggcagttcccaa
cccgcatcaatattagcctctaactcagtagaccagtctatagaaccaaaggttgaggac
tgtgagacttccatcatggaagtcaaccaaagcttttcgtcaccggttcagctgaagcaa
caaggttgccagaccactgtagtaaaggcagaggcttcacaagaggagtgcacagctcct
ccacctcctttggctggtagacccttactgaaaaacagtaaagattcccaattagcagca
gccttcccacactcaggccctaaaaacggggacatcaccactctccatgagaccccctct
ggcttgactgtcctcaagcagcttctccagaaaaggcagctgggacaggctcttcctcta
caagtggttggtacagacagccacttcactgccatagctcaggccacagtgctacttgat
cccacaactaagccagctaatcccaagagagctccctccaccgctcctcgaaaacccagg
gccccaaaatctactcccaaggacaaaaagcccagaatcaagaaaggcaaggcaagcagc
actcagccaaatctatcagagaagcaggagggcaaaatggcggatgattgccccctcttc
ctgtcagatccaggccttgatagctgcaacttcatagaggacagcttgtcaccagagctc
ccacacaactatacctttgatataaatgccattgatcagacggagttctccagcccatac
agtggcagtcagtttgtcctgactgataaaaatttaccagttaagttcctgagtgatgtc
agccaggaagctgtatccgctccagcactgggctttcagaagaaacgtgataggcggttg
gattctggggaggagtttcaaagaggctctgactggcacaaagcagggcccatcagccct
gacctctttgacaaacccaagaacggggagtctgactcaaatcacctcgccttccttgac
tcagagaaaatccaaagcagagagtgggacttctctttaggtaaagcccatacactgagc
ccctttcaagacttccactgtgagagaaaagagctgctcttttccgtctttgatcctgtc
ctgcctttgcctttaagctctgcgtcatttgttgagcatgagggctcaccaacaggagag
cttctggagggcattgatggactatcgtccagtagctctccgcgctccatcagctcactg
tcccaggtgcgggcgagccagctgctgcgggcagcaggaggcggagcccacatcctcaag
cccctcatgtctcctccaagccgggaggagatcctcagcactctgctggacctggagatg
tcggaggccaccttccaggagcccttctgcagcaacccctctgatgtgccagggaaacca
atggaggtcggcggccgaaagttaacagtgcgcactaggttggctaaggagcttgcggag
ttcagtggagacctgtctttggagggtctccatttttggaaaacagccttctcagccatg
acacaccctgccatcactattacctcatgttcccaagtccagggagctgaagcctcagaa
gcaagtaaggagcaccagtcctcagccggtgacaagaaggtcatccttctgccctgtaaa
aacccaccaggcagagagcgtgtgcagctgtggctggaagccaggaaacagtacgatagt
ttacaaaaagggctgagaagcaggaagagcccacaaagaactgagcagccagctgcttcc
agctgtccagaagtaaaggttgagctggcgaaaagactctccagcatcaggacccaaagg
agaaagaaatgcaacctgtccctaataatatctcccatgaggaatacaggctctcattgt
aaatccacagaggtgagtccagtttcagatgaaggcggtctggattttgagcaggagggt
ggagaaaaacattatgatgacgataccacctctccagagtccccggagctgcctacctgg
cagcagtcttgccagtccagccccttagggccggaccggctcagtgaaaacaggcaaaac
tctccagaaccactgtcacctcggctttcggactccctggagagactgggggaagaggcg
gggactggtcctctccaccttcacagcaccccctttttaaggagaaggcggagaagcaag
gaagatccagagccagtgtgcagcacgcccatatctgaggaggatgccaattctcagaga
ctccagcagagaaggagaagccaagcggacccactgagaagagtgttactgaccacacag
atgaagaaccagtttgctgctttgaatgtgccaaagaaagataactctcagattgaaggg
cccagcatagccaactcttacggcttcaaaatcagcatgcaaaacctgcaggatgccaaa
gctctgcatgaggtccagtaccttacactgatggccatggagctccatgcaagaacccga
cgggacctagagcctgaccctgagtttgaccccatatgtgccttattctactgcctcagt
tctgacgctcccctgccagacatagaaggcacccagctgacgggtgccatcgtggtggac
aaagaccaccaaagttgtgacccagcaggtcacggagtagccgcgcccctgctggtcagg
tcgggcgtctctgggctgcaggtgacgtacgccgctgatgagaaggtgctgtttcaggag
ctgatcgccatcatgaggaggtttgacccagacatcctggtggggtatgaggtgcagatg
cgttcgtggggctacctcctccagcgggccgcagtactgggagtggacctgtgtcagcag
ctgtcacgagtgccaggtgactccaaagagaaccgcttcgctgcagagagggatgagtac
ggcgccgacaccatgactgagatcaacatcatcggacgcatcactctcaacctgtggagg
gtgatgaaaactgaggcggcgttgaacaactacacttttgagaacgtggccttccatatc
ctccaccagcgcttccccctgtacagcccccgcacactgtccgactggtttgaccacaac
acccacctctacaggtggaagatggtggaccactacgtgagccgtgttcgcggcaccatg
cagcttcttcagcagcatgacatcatcggcagaaccagcgagctggcccgagtgttcggg
attcagttctttcacgttctgacccgaggatcacagtaccgtgtagagtccatgatgcta
cgtgtggccaagccgttgaactacatccctgtgacacccagcatgcagcagcgagcccag
cagcgggcgccgcagtgcattccccttgtgatggagccggagtcgcgcttctacagcaac
tcagtggttgtactggacttccagtcgctctatccctccatcgtcatcgcgtacaactac
tgctactccacctgcctcggccacgtggacagcctgggaacgcctgatgagtttaagttc
ggctgcacctccctgcgggttcctccggagctcctctaccagctccgcaacgacatcaca
gtgtcacccaacggcatagccttcgtcaagtcttcagtgcgtaaaggcgtcttgcccagc
atgctggaggaaatcctgaacacgaggatcatggtgaagcagtcgatgaaaacgtacaag
caggacaaggctttgatgaggctgctggacgcccggcagctcgggctcaagctcattgcc
aacgtcaccttcggctacaccgccgccaactactctggccgcatgcccagcgtggaggtt
ggggacagcatcgtccacaaagccagagagaccctggagagagccatcaagctggtcaat
gacactaagaaatggggagcgcgtgttgtgtacggagacacagacagcatgtttgttttg
ctgaagggagccaccaaagagcaggccttcaagatcggcaacgagatcgctgaggcagtg
actgcaaccaaccccaagcccatcaagctcaagtttgagaaggtgtacctgccctgcgtg
ttacagacaaagaagcgctacgttgggtacatgtacgagagccttgaccaaaaggagccc
gtgtttgacgccaaagggatcgagacagtgcgccgtgacaactgccccgctgtttccaag
attctgcagcggtccattaagctgctgtttgagactcgggacatcagccaggtgaagcag
tttgtgcagcatcagtgcgtgaagattctggacggccgggccagcatgcaggacctgacc
tttgccaaagagtaccggggcagcacgtcataccggcccggagcctgcgtgcctgccctg
gagctcaccaggcgtatgatggcgcacgatcgtcgcctggagccccgcgtgggcgagcgg
gtgccctatgtgatagtgtacgggatgcctggcgtgcccctcatccagctggtgcgtcgg
cccatggaggtgctgcaggaccccggcctccgcatcaacgccacctactacatcaccaag
cagatcctgccgccgctggcccgcatgttccagctgatcggagtggatgtgttcagctgg
taccaggagctccccaggatccagaaggcgtcctgctcctcggcggtgggcgcagaggaa
gtgggaaggaagggaaccatttcccagtacttcaccacgctccactgcccagtgtgtgac
gagctgacccagctgggcgtgtgctcgcagtgccgcgctgagccgcagcgagtcgccgtg
acactcaaccaggacatgagacagtgggagagtcagcaagaccagttgttgaagatctgt
aggaactgtagcggctgtgcagagcgccaggtatcttgcgtgtcactggactgtcccacc
ctctacaagctgtcccaggtcaacagacagctctccaaggccccctacctccgacagctg
ctggagcagttctga
DBGET
integrated database retrieval system
