Etheostoma cragini (Arkansas darter): 117962073 Help Entry 117962073         CDS       T07493                                  Symbol col4a6 Name (RefSeq) collagen alpha-6(IV) chain   KO K06237   collagen type IV alpha Organism ecra  Etheostoma cragini (Arkansas darter) Pathway ecra04382   Cornified envelope formation ecra04510   Focal adhesion ecra04512   ECM-receptor interaction ecra04518   Integrin signaling ecra04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ecra00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     117962073 (col4a6)    04518 Integrin signaling     117962073 (col4a6)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     117962073 (col4a6)   09142 Cell motility    04820 Cytoskeleton in muscle cells     117962073 (col4a6)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     117962073 (col4a6)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ecra04147]     117962073 (col4a6)    00536 Glycosaminoglycan binding proteins [BR:ecra00536]     117962073 (col4a6) Exosome [BR:ecra04147]  Exosomal proteins   Exosomal proteins of other cancer cells    117962073 (col4a6) Glycosaminoglycan binding proteins [BR:ecra00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    117962073 (col4a6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  117962073 NCBI-ProteinID:  XP_034757006 LinkDB All DBs Position 19:complement(1743188..1874322) Genome browser AA seq 1697 aa AA seqDB search MKLLICVIAVAWAVGSAHGGVGKSDEPCGGRDCGAGCRCSPEKGSRGRPGALGEVGQSGP EGPRGGLGPTGPKGEKGHLGLKGPSGPKGDKGPMGVPGFQGNDGVPGHPGQGGSRGPPGL DGCNGTIGEPGYPGFGNGEPGFPGITGPGGPKGQKGEPQFISNGITGLPGPPGVDGFPGV RGPDGPPGFTGPRGPEGFSGVPGPPGPPGPMGSRSDGYVGEKGDKGDSGLPGPSGTPGDG SLRSEQTLTIYKGDKGEPGQKGVRGFTGNPGPPGLFGYRGELGEKGIPGYPGARGPPGFN GPPGAPGQQGLIGTPGFPGQPGYIGPKGDQGDQGAPGPPAYVSNFGTLIQGLTGDPGFNG LPGAPGDQGFPGYPGQPGQPGIGGFGTGRPGAPGFPGNSGPKGEKGNPGLEVYGPEGIPG SPGLPGPPGPPGPQGSFGTFTQDRLTKSPLSTAGHGGSCRGSFERREGDPGDCACIGGGT SGLPGLPGAPGANGNPGFAGRKGELGDGGPPGFNGGQGPPGRAGELGFSGRKGEKGASYY PNQGLGVKGELGDPGPRGPTGETGKPGRDGRPGFPGIPGPPGDAGFGTVGEKGFPGFPGP KGRSGGPGEPGIGYPGLPGFRGEPGDPGIPGEPGPRGLPGLKGENSCEGVNGAGEGTGSA LPCTIPGEEGDPGDPGIPGRPGPKGQPGNPGGPGRAGFNGAKGERGDPGFGGQPGPQGFP GPRGDPGVPGAPGQSFDGARGKDGTPGRPGAKGQTGEVLGANPGGPGRDGALGIPGDKGQ PGTPGQPGLPGSDGRFGVPGVKGERGVDGAPGDPGLPGLPGDPTFGIPGRRGPPGVSGPG GSPGCQGYPGRKGERGDPGFPGPAGMKGTPGLPGTDGSPGPRGPPGPPGPGTREGIPGTQ GRKGERGVSGLVGFPGLPGRPGSPGFPGGKGLAGGPGRDGRPGGPGFPGMKGDRGVPGLP GPPTRFDPTSRGIKGEPGNPGANGLPGFPGPRGDKGLSGQPGRPGLPGLPGYAAQSKGQP GEPGFPGRPGAPGFPGPKGEAGIMGFPGMSGPRGDDGVPGFPGNPGEFGRPGGKGAPGES YGYPGAPGLKGQPGDSGFPGGRGYDGAPGDTGIPGSPGFPGVKGSPGDRGRPGFMGSPGF PGPNGLSSYPGRRGADGPPGPPGGPGGPGAKGLPGSPGLDGLNGLAGPKGLPGTPGGSVG GRPGASGAPGLKGERGVSYPGAPGFPGQKGERGNTGGPGLVGFPGLPGPPGPTVGSNVPG PLGDPGLPGLDGEYGRQGPPGSPGPPGPGTAQGDRGDSGLPGFPGSPGRKGDSGIPGGAG LPGSPGFKGARGETGYGGGPGLNGFPGDPGYYGNKGPKGVQGRPGRKGSPGVALPSPPPK FEKRFGDVGSPGPVGSTGVPGESGPPGMPGRPGPKGRLGPVGKLGRTGSAGFPGPVGDAG PPGFLGPTGEQGPTGQAGRPGAPGGVGRSTSIGYTLVKHSQNSQVPMCPQGMAKLWDGYS LLYVEGQEKAHNQDLGQPGSCLPRFNTIPFLYCSPNEICYYASRNDKSYWLSTTAPIPMM PVAEEQIQPYISRCSVCEAPSQPVAVHSQDMTIPTCPPGWRSLWIGYSFLMHTAAGAEGG GQSLQSPGSCLEDFRATPFIECNGGKGTCHYFANKYSFWLTTVDPRQEFVYSPAQETLKG GQERSKVSRCQVCSKIL NT seq 5094 nt NT seq  +upstreamnt  +downstreamnt atgaaactcctgatttgtgtgatagcagtcgcctgggccgtgggatctgcgcacggaggc gtggggaagtctgacgagccgtgtggaggccgggactgcggcgcaggatgccggtgcagc ccggagaaaggcagcaggggtcgtccaggggctctcggtgaagtcggtcagagcggacca gaggggccacgtgggggcctggggcctacagggcctaaaggagagaagggccatcttggc ctaaaaggaccatctggccccaaaggggacaagggacctatgggagtgccggggttccag ggaaatgacggagtacctggtcacccgggtcagggcgggagcagaggaccgccaggactg gacggatgtaacgggaccataggagaacctggatatcccggctttgggaatggagaacct ggattccctggaatcactggccctggcgggccaaagggtcagaaaggagagcctcagttc atctcaaacggcatcacgggtttaccaggtccaccaggagtggacggttttcctggggtc agaggtcctgatggtccacctggttttaccggtccgagggggccggagggattctccggt gtgcccggtcctcccggccccccagggccaatggggagccgtagtgacggatatgtagga gagaaaggagacaagggcgactcgggtcttcccggacccagcgggacccccggcgacggg tcgctcagaagcgaacaaactctcactatctacaaaggagataagggtgagcctggccag aagggagtcagaggattcactggcaatcctggcccacctggactgttcggctatcgtggt gaactcggagagaaaggcattcctggataccccggggcaagaggtccccctggttttaac gggccccctggagctccgggacaacagggattaataggtactccaggtttccccgggcaa ccaggatacattggacctaagggagaccagggtgaccaaggagcaccgggacctccggct tacgtttctaattttggcactttaattcaaggactaacgggtgacccgggtttcaacggc ctccccggtgcccctggtgaccagggattcccaggatacccaggacaaccaggccagcca gggattggaggatttggtacaggtcgtcccggagctcccggtttccccgggaacagcggc ccaaagggagagaaaggaaacccaggtttagaagtgtatggccccgaaggaatccctggc tcccctggactccccggcccccccggccctcctggacctcagggctcgttcggtacgttc acacaggatcgactgacaaaaagccctttatccacagctggtcatggtgggagctgtcga ggctcgtttgagaggcgagaaggcgatcctggcgactgtgcctgcattgggggaggcacc tcagggttgcccgggttacctggagccccgggagccaacggcaaccccggctttgctgga cgaaagggcgagcttggtgacggcggtccaccgggctttaatggcggtcagggccctcct ggtcgcgctggtgagctcggtttctcgggacgtaagggagagaagggggcgtcgtactac cccaatcagggcttgggggtgaaaggagagctcggagatcctggacccagaggaccgact ggggaaactggaaaaccgggcagagatggacggccgggcttcccgggaatccctggcccc ccaggtgacgctggctttggcacagttggagagaaaggtttcccagggttcccggggcca aagggtcggtccggtggccccggcgagcctggcatcggctaccccggcttgcctggcttt cgcggagagcctggagaccctggtattcctggagaaccagggccacgaggtttacccgga cttaaaggtgaaaacagctgtgaaggggttaatggcgccggagagggaacgggctcagct ctaccttgcaccatccccggggaggaaggagaccccggtgaccccggtatacctggacga cctggtcctaaaggtcaacccggtaacccaggaggccccggacgtgccgggttcaacggt gccaaaggagagagaggagaccctggttttggaggccaacctggaccacaaggtttcccg ggacccagaggtgatcctggagttccaggtgctcccggacagagtttcgacggagccagg gggaaggatggcacccctgggcgtcctggagccaagggccagaccggagaggtactggga gccaatcccggtggcccaggacgggacggggcactgggtatccctggagacaagggccag cccgggacgccaggacaacctggattacctggtagtgacggacgcttcggtgttcctggg gtgaagggggagcgcggagttgacggtgctcctggtgatcctggtcttcccggacttccg ggcgatccgacttttggcattcccggtcggcgtggacctcctggcgtgagcggaccgggc ggatcaccaggctgccaaggttaccccggtcggaagggagagagaggggaccccgggttc ccaggaccagctggaatgaagggaacaccaggactgcccggcaccgatggatcaccgggg cccaggggacccccgggaccaccaggaccgggaaccagagagggaatcccaggaacacaa ggaaggaagggtgagcgaggtgtatccggactggtgggtttccctggactaccgggtcgt cctggtagtccagggtttcctggaggcaaaggactggctggagggcccggaagagacgga cgccctggcggtcccggattccccggaatgaaaggtgacagaggagtacccggtctcccc ggcccgcccactcgttttgacccaaccagtcgtggtataaaaggagaaccaggaaacccc ggagcgaacggtcttcctggcttccccggacccagaggtgacaagggtctgtcaggtcag cccggtcgtcccggtctccctggacttcctggttatgctgcgcagagcaaaggacagccg ggagagccggggttccctgggcgaccaggagcgccaggcttccccggaccgaagggagaa gctggaatcatgggattccccggcatgtctggaccaaggggtgatgatggcgtacctggt ttccccggcaaccctggagaatttggtcggcctggtggcaaaggggcacccggtgaaagt tacggttatcctggagctccagggcttaaaggccagccaggagattcaggcttcccaggt ggccgtggctatgacggcgcccccggtgacaccggcattccaggaagtccaggtttcccc ggagtgaagggatctcctggtgatagaggacggcctggatttatgggctcccctggtttc cccgggcccaatggcctgtccagctacccaggaagaagaggagcagatgggcctcctggt ccgcctggaggtccgggaggtccaggagccaaaggtttgcccggatcccctggtttggat ggacttaatggccttgctggacctaaaggcctccctggaaccccaggtgggagtgtaggc ggtcgcccaggagcctccggtgctccggggttgaagggagagagaggagtctcgtatccc ggagctccaggcttcccggggcagaagggagagagaggaaatacaggtggtcctggactc gtggggttccctggtctgcccggacctcctggtcccactgtggggtcgaatgtccccgga cctttgggagaccctggcctccctggactggacggagagtatggtagacaaggtcctcca ggttctcccgggcctcctggtccaggcacagcccagggggacagaggtgactctgggctc ccgggcttccctggctcccctggcaggaaaggagactccggcatacccggaggtgccgga ctccccggcagtcccggtttcaaaggagcacgaggtgagactggctacggcggaggtcct ggtctcaatggtttccccggtgaccctggatactatggaaacaaaggacccaagggagta caagggcgtcctgggcgtaagggtagccctggagtggcgctgccttcgcccccaccaaag ttcgagaaacgcttcggagatgtgggttctcccggtccagttggcagcaccggtgtcccc ggagaatccggtccgccaggaatgcccggacgtccaggtcccaagggtcgtctcggtccc gtgggtaaacttggcaggactggatctgctggttttcccggacctgtcggcgacgccgga ccccccggtttccttggacccactggagaacaaggtcccactggtcaggccggtcggccc ggcgctcccggcggcgtgggccgcagtaccagcatcggctacactctggtgaagcacagc cagaactcccaggttcccatgtgtcctcagggcatggccaagctgtgggacgggtacagt ctgctgtacgtcgagggacaggagaaggctcacaaccaggacctcggtcagccggggtcg tgcctccccaggttcaacaccatccccttcctctactgttcccccaacgagatctgctac tacgccagccgcaacgacaaatcctactggctctccaccactgcacccatacccatgatg cctgtggccgaggagcagattcagccttacatcagcaggtgttctgtgtgcgaggctccc tctcagcctgtggcggtccacagtcaggacatgaccatccccacctgtccccccggctgg aggagtctctggataggatactccttcctcatgcacacagcggccggcgccgagggcggc ggtcagtccctgcagtcccctggctcctgcttggaggacttccgcgcgacgccgttcatc gagtgcaacgggggaaagggcacctgccactacttcgccaacaagtacagcttctggctc accaccgtggacccccgccaggagttcgtttattcgccagcacaggagaccctgaagggg ggccaggagcgctccaaagtcagccgctgccaagtctgcagcaagatcttgtag

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