Etheostoma cragini (Arkansas darter): 117962084
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Entry
117962084 CDS
T07493
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117962084
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
L27_1
Motif
Other DBs
NCBI-GeneID:
117962084
NCBI-ProteinID:
XP_034757029
LinkDB
All DBs
Position
19:13613496..13680743
Genome browser
AA seq
2100 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQHVRD
QGSVPASRGSDLSDHVAEVKPNGGHVSSSDISTSTLINGKTASEEFEHLIHTMAQGRYVT
HVDLQKPESGGLGFSVVGLKSENRGELGIFIQEIQPGSVADCDGKLKEADQILAINGQPL
DQTVTHQQAIGFLQSASERVQLTVARGPIPQLISPAVSRTPSAASTLSANSSAWQHVETI
ELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGRLRSGDHILRIGDTDLHGMGSEQV
AQVLRQCGNRVKLVVTRGPVDENPTLSAVMPVVLPTVNEQGYEEEEDDAFDVSLTKNTQG
LGITIAGYVGDRNAEPSGIFVKSITKGSAVDQDGRIHVGDQIIAVDGVNIQGYTNQQAVE
VLRHTSQTVHLKLIRRDFRPDEIPLAVAPGVSALSPRTTIPTTAVVVMELERKKAEEAAE
VTTDEKPLQTKSEGSDVSPATAQLTEDTHGIKLTPFEEEELMKKWLEILGPSNEVVVAQV
EKFSENSGLGISLEANSGHHYIRSVLPEGPVGRCGKLFSGDELLEVNGISLIGESHKEVV
RILKELPLCVYMTCCRPAPYLQTIMDAVQPGSETLSTTSILKKQIDLSSVLVAEESEEKA
AAEDNVTQEVIGSPLAMWELEIQNIELEKGGGGLGFSILDYQDPLDPAKTVIVIRSLVPC
GVAEQDGRLLPGDRLMYVNTTNLENASLEDAVQALKGAGLGKVQIGVAKPLPGICGYSHS
PHPYGEQEITSSSIIHSFDFNSILVEEGEEEGLTEGIVYRAEPALIDTSEADLSDEKVLD
HTYSGMEDDTFQVSLIALHGSSCSADLDYLHASTPKLTARLDLLDEHPCFATPSGLVDDT
RAFSPEKSASFSPPSFRGHGPTFNAILSSSDQFLAHHSTKEEPVECSNSYSPFAEIGTRS
SVPDEPVESLPYQEPAMAFEDITDIKMFIKDDEPGVKEDGEEEVLTSGSNFERTITVVKG
NSSLGMTVSALKDGLGMLIRSIITGGSISRDGRLGVGDLILAINGELTANLTNAQARAML
RRHSLIGPDMGSACAPEEDLCPFYVITYVPAEYLDEYKTSLEQAKDDVFSEPAPVLVPDP
KEIPNLPEREDGEGEENASYNNWNQPRKVELFRAPGKSLGISIVGGRGMGSRLNNGEVMR
GIFIKHILEDSPAGQNGTLKTGDRIVEVDGADLRDASHEEAVEAIRRAGNTVSFLVQSII
HRPRSSVTDSSEDRAAAMTRDNKDKEGYSHSRLFRLSPINPFTPTPFKLVKREEAKTSPT
SAVLLPVVPHVGETDTDTLTETPGRPAETEEEEVVVEDEFGYSWNKIIQRYGSLPGVIHM
IELEKGKAGLGLSLAGNRDRSRMSVFVVGIDPNGAAALDKRMVVGDELLEINGQVLYGHS
HQNASSIIKSSPSKVKIIFVRNTEALNQMAVGPVREHEGDKAEPHTELETTAANGDAHTS
KYEHHVIKLKEDGGLGITFVEGNTESGIEIQSISEGKGHTGKEGCMKPGDKLLAVNGESV
LGYTVEEVSSLLRKAKGPVKVAFSTNETPSSLSSLPSTCQDGDCSPDVLVSLPSMLSAAT
TTLSQQEAEAVPSLSRSSTPSTLACDPATCPIIPGCETTIDISKGRTGLGLSIVGGCDTL
LGAIIIHEVYEEGAASKDGRLWAGDQILEVNGIDLRAATHDEAINVLRQTPQRVRLVVYR
DEAQYKEEDLWDSFTVELHKRPGQGLGLSIVGRRSRDERNDTGVFVSDIVKGGLVDTDGR
LMQGDQILSVNGEDVRSTTQEAVAALLKCCVGPIIMEVGRFKAGPFHSERRLSQCSQMSE
TGSTKVASLSCSDSGNVPGDSDKRSTTPDSPEHQDTRTVEFTKGASDSLGISIAGGVGSP
LGDIPIFIAMMNPVGLAAQTQKLKIGDRIVSICGASAEGMTHSQAVTLLKNATGTIQLQV
VTGGDTTVTGPSQEQAAPGLTPSCIFQDDLGPPQYKTINLERGPDGLGFSIVGGYGSPHG
DLPIYVKTVFGKGAAAEDGRLKRGDQIMAVNGQTLEGVTHEEAVGILKRTKGTVTLTVLS
NT seq
6303 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaacaatggatacgcagcgtgccttgcaggctgtggagcgtctccaggccaaa
ctgaaggagcggggggaggtgcccactgaggagaagctcagcctgctcaaatcagtgctc
cagagtcccctcttccaccagatcctcgccttgcagaagtctgtccagcatgtcagagac
caggggagtgtcccagcgtcacgcgggagcgaccttagcgatcacgtagcagaagtcaag
cccaatggcggccatgtttcctcctcagacatatcaacttctaccctcatcaatggcaag
acagcatctgaagaatttgagcaccttattcacaccatggcacaggggcgctatgtaaca
cacgtggaccttcagaagccagagtcaggaggtcttggcttcagcgtggtgggcctaaag
agcgagaaccgcggcgagttgggcatcttcatccaggaaattcaacctggaagtgttgct
gactgtgatgggaagctcaaagaagctgaccagatcttagccatcaacggccagcccctg
gaccagaccgtgacccaccagcaggctataggcttcctgcagagtgcttcagagagggtg
cagctcacagtggcacgaggaccaatacctcaactgatcagtcccgcggtgtcccgcacg
ccctctgctgccagcacactgtcagccaactccagcgcgtggcagcacgtggaaacaatt
gagctggtcaacgacggcaccggtcttggcttcggtattgtgggaggaaagaccaccggg
gttatcgtcaaaaccatccttcctggaggcatagctgatcaggatggccgcctgcgcagt
ggggaccacatcctcagaattggagacactgacctgcacggcatgggcagtgaacaggtg
gcccaggtcctcaggcagtgtggcaacagggtgaagctggtggttaccaggggtcctgtg
gatgagaatcccaccctctctgctgtcatgcctgtggtgctccccactgtcaacgaacag
ggctatgaggaagaagaagatgacgcatttgatgtgagccttaccaagaacacgcaggga
ctggggatcactattgctggctatgttggagatagaaatgcagagccctctggcattttt
gttaagagcataacaaaaggcagtgccgtagatcaagatggccgaattcatgttggagac
cagataatagctgttgatggcgttaacatccagggatacaccaatcagcaggcagtggaa
gtgctcagacacacgagccagacagtccaccttaaacttatccggcgggacttcaggccg
gatgagatcccccttgcagtggcccctggtgtcagtgccctatcccctcgcaccaccatc
cccaccaccgccgttgtcgtgatggagctggagagaaagaaggctgaggaggctgctgaa
gtcaccacagatgaaaagccactccagacaaagagtgaaggatctgatgtcagcccagca
acggctcagctaacagaagacacacatgggataaagctaacaccctttgaagaggaagaa
ctaatgaagaagtggctcgagattctgggtccaagtaatgaagttgttgtggctcaggtg
gagaagtttagtgagaacagcggcctgggcatcagtttagaagccaacagtgggcaccat
tacatccgatctgtcctacctgagggacccgtaggacgctgtggcaagctgttcagtgga
gatgaactgcttgaggtcaatggtatatctctgattggtgaaagccacaaggaagtagtc
aggatcttaaaggagcttccactctgtgtgtacatgacgtgctgtaggcccgccccttac
ctgcagactattatggatgctgtccaacccggatcagagactttgtccacaacgtctata
ttaaagaaacaaatagacctgagcagcgttctggttgctgaagagtcagaggagaaggca
gcggccgaggataatgtgacacaggaggtgataggatctcctttggctatgtgggagttg
gagatccagaatatcgagcttgaaaagggaggaggaggattgggattcagcattctggac
taccaggacccactggaccctgccaagacggtgatcgtgattcgctctctggttccctgc
ggtgtggccgagcaggatggcagactgttgccaggagaccgactcatgtacgtcaacacc
accaacctggagaacgccagtctggaggatgctgtccaggccctgaagggagccggcctc
ggcaaggtccagataggagtagccaaaccactacctggaatatgtggatattcccactct
ccacacccatatggtgagcaggaaattacttcatcatccatcatccattcatttgacttc
aacagtattttggttgaagaaggagaggaagaaggactgactgagggcatcgtttaccga
gcagagcctgcattgattgacaccagcgaagcggacctgtctgatgaaaaggtgttagat
cacacttactctgggatggaggatgatactttccaggtgtccctgattgctcttcatggt
agcagctgtagcgcagacctggattacctgcacgcatctacgcccaagctgacagctcgt
ctggacttgttggatgagcatccctgctttgcaacgccatccggccttgtagacgacact
cgagcgttctccccggagaagtcggcctctttctctcctccgagtttcagaggtcatggt
ccaacttttaatgccatactaagcagttctgatcagtttctggcacatcactccaccaaa
gaggaacctgtggagtgctcaaactcctacagcccgtttgccgaaatagggaccagatcg
tccgtcccagatgaacctgtggagtctcttccctatcaggagccagccatggcttttgaa
gacattacagatataaagatgttcattaaggacgatgagcccggtgtaaaggaagacggc
gaagaagaagtactgacctcagggagcaattttgaaaggactatcacagtcgtcaagggc
aactccagccttgggatgaccgtgagcgccttgaaagatggtttgggaatgctgatccgc
agtattatcaccggtgggtccattagcagggacggtcggctgggcgttggcgatctcatc
ctcgccataaacggggagcttacagccaacctgaccaatgctcaggcccgcgccatgctc
agacgacactctctcattggaccagacatgggatctgcttgtgcacctgaggaagatctg
tgcccattttatgtcattacatatgttccagcagagtatctggacgagtacaagaccagc
ctagagcaggctaaagatgatgtcttttctgaaccggctccagtcctagttccagatcca
aaagaaattcctaacctccctgaacgggaagatggagaaggagaggagaatgcctcttac
aacaactggaaccaacctagaaaggtggagctctttcgagcgccaggcaagtccctgggt
atcagtatcgtcggaggccgagggatgggcagccggctcaacaacggtgaggtgatgaga
ggcatttttatcaagcacatcctggaggacagtcctgctggacagaatgggaccctaaag
accggagacagaatcgtggaggtggatggagcagatctaagagatgccagtcatgaggag
gcagtggaggccattcgcagggcaggcaacactgtctctttcttggtgcagagtattatc
cacaggcccaggtcatcggtaacagactccagtgaggacagagcagcagctatgacgagg
gacaacaaggacaaggagggttacagtcacagtagacttttccgcctctccccaattaac
cctttcactcctaccccgtttaagctggtgaagcgtgaagaggcgaagacatctcccacc
agcgctgtcctcctgccagtggtgccccatgtgggagagaccgatacggacacgctaacg
gagactcctggcagacctgctgagacggaggaggaggaggtggtggtggaggatgagttt
ggatacagctggaataagataatccagcggtatggcagcctccccggtgtcatacacatg
atcgagctggagaaaggcaaggcaggcctgggcctcagcctggccgggaacagggaccgc
tctcgcatgagtgtgtttgtggtgggaatagaccccaacggggcagctgccctggacaaa
cggatggtagtgggggatgagctgctggagatcaatgggcaagtcctttatggccacagt
caccagaatgcatcctccataatcaagagctctccatccaaggtcaaaatcatctttgtc
aggaacacggaggcgctgaaccagatggctgtgggacctgtgagagaacacgaaggagac
aaagcggagccccacactgagctagaaacaactgctgctaacggggatgcccatacttca
aaatatgaacatcacgtcataaagctgaaggaggacggaggacttggcatcacctttgtg
gagggaaacactgagagtgggattgagattcagagtatatctgaagggaaagggcacaca
ggcaaagagggctgcatgaaaccaggggacaaactcctagctgtgaacggggaatctgtg
ctaggctacacggtggaagaggtcagttctctactgagaaaagccaaaggtccagtgaag
gtagccttctccacaaatgagaccccctcctcattgtcctctctcccgtcaacctgccag
gacggcgattgctcgccggatgtccttgtcagcctacccagcatgcttagtgccgccacg
actaccctgagtcaacaggaggcggaggcagtccctagtctgagtcgctcttccacccct
tccactctggcctgtgacccggcgacctgtcccatcatccccgggtgtgagaccaccatt
gacatctccaaggggcgcacaggcctgggccttagcatcgtgggaggctgtgacaccctg
ctgggcgccatcattatccatgaagtttatgaagaaggggcagcctccaaagatggcagg
ctttgggcaggagaccaaatcctagaggtgaacggcatcgacctgcgtgcagccactcac
gatgaagccatcaacgtgctgcggcagaccccgcagagagtccggctggtggtctacagg
gacgaggcccagtacaaggaggaagacctgtgggactccttcaccgtggagctccacaag
aggcctggccagggcctgggcctgagcatcgtagggaggagatcacgggacgagaggaat
gacacaggggtgtttgtgtctgacattgtgaaaggaggtttggtggacacggacggccga
ctgatgcagggcgaccagatcctgtcggtcaacggggaggacgtcaggtcgaccactcag
gaggccgtagctgcactgctcaagtgctgtgtggggcctataataatggaagtggggagg
tttaaggccggccctttccactcagaaagaagactgtcccaatgtagtcagatgagtgaa
acaggcagcaccaaggtggcctcgctgtcatgttcagactctggcaacgttcccggtgac
tctgacaaacgaagcacgactccagattctccagagcatcaagacaccagaacagttgag
ttcactaaaggcgccagtgattctctgggtatcagtatagcagggggcgtgggcagccct
ctgggggatattcccatcttcattgccatgatgaatcctgtcggcctggctgctcagacc
cagaagctcaagattggggaccgcatcgtcagcatctgtggagcttctgctgaaggaatg
acccactcacaggctgtcacgctgctcaagaacgccacaggcaccatacagctgcaggtg
gtaacgggtggtgacaccacggtgacgggtccctctcaggagcaagcagctccaggtctc
acacccagctgcatcttccaggatgacctcggcccacctcagtataagaccatcaatctt
gaaagaggaccagacggactgggtttcagtatagtcggggggtacggcagcccccatgga
gacttacccatctatgttaaaactgtttttggaaagggggcagcagcggaggacggccgc
ctgaagcgaggagaccagataatggccgttaacgggcagactctggagggcgtcactcat
gaagaagctgttggaatcctgaaaaggaccaaaggaacggtcacgctcacagtgctgtca
tag
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integrated database retrieval system
