Etheostoma cragini (Arkansas darter): 117962092
Help
Entry
117962092 CDS
T07493
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117962092 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117962092 (dhx15)
03009 Ribosome biogenesis [BR:
ecra03009
]
117962092 (dhx15)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117962092 (dhx15)
Spliceosome [BR:
ecra03041
]
Complex A
U2 snRNP components
U2 related factors
117962092 (dhx15)
Complex B
117962092 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117962092 (dhx15)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
90S particles
Helicases
117962092 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_29
nSTAND3
Motif
Other DBs
NCBI-GeneID:
117962092
NCBI-ProteinID:
XP_034757059
LinkDB
All DBs
Position
19:complement(14994121..15022549)
Genome browser
AA seq
758 aa
AA seq
DB search
MYKRHRLDLGDDSPSKKRPSDERDRDRDRDREERSRDRDRDRDRDRDGDRDVKSSAAPNS
LAAGSGSFLKQIPILQPINPFTNLPHTPRYHEIMKKRLQLPVWEYRERFTDILMCNQSFV
LVGETGSGKTTQIPQWCVDMVRSMSGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEV
GYSIRFEDCSSPKTLLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLK
EVVRQRADLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIR
TVIQIHMCEVDEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQ
QRIFEPPPPNKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLL
VTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL
GIDDLVHFDFMDPPAPETLMRALELLNYLAALNDGGDLTELGSMMAEFPLDPQLAKMVIA
SCEFNCSNEILSITAMLSVPQCFVRPTEAKKVADESKMRFAHIDGDHMTLLNVYHAFKQN
HDSTQWCYENFVNYRSLMSADNVRQQLSRIMDRFNLPRKSTEFSSRDYYTNIRRALVTGF
FMQIAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEW
LVKIAPQYYEMGNFPQCEAKRQLERIIAKISSKEHTQY
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagcgacatcgtttagatttgggggatgattcgccgagtaaaaagagaccctct
gatgagcgtgaccgtgacagggacagagaccgtgaagaacggtcgagggacagggaccgc
gaccgggatcgagaccgtgacggggacagagatgtgaagtcttcagcagcccccaacagt
ctagctgcaggcagtggaagcttcctaaagcaaatccccattctgcagccgatcaacccc
ttcaccaacctgccccacacgccacgctaccatgagatcatgaagaagcggctgcagctc
cctgtctgggagtacagggagcgcttcactgacatcctgatgtgtaaccagtcgtttgtg
ctggtgggagagacaggctctggaaaaaccacacagatccctcagtggtgtgtggacatg
gtgcggtcaatgtcgggaccaaagagagcagtggcctgcacccagcccaggagggtagcg
gccatgagcgtcgcccagagggttgctgacgagatggatgtcatgctgggccaagaggtg
ggctactccatcaggtttgaggactgcagctctcccaagaccctactcaagtacatgaca
gatggaatgttgttgcgggaggctatgaatgatcctctgctggagcgctatggtgtcatc
atcttggacgaggcacacgaacgcactttagctacagatattctcatgggggtcctcaag
gaggtggtccgccagagggctgacctcaaggtcatcgtcatgagtgccacgctcgatgcc
ggaaagttccaggtgtactttgacaactgcccactgctaaccatcccaggacgcacccac
cctgtggagattttctacacaccggagcctgagcgggactacctggaggcggccatccgc
actgtgatccagatccacatgtgtgaggtggatgaaggggaccttctgctcttcctcact
ggacaagaggaaattgatgaagcctgcaagcgaatcaagagggaggtcgacgacctgggg
ccggaagtcggtgacatcaagatcatcccgctttactccacactgcctccacagcagcag
cagaggatctttgagccacccccacccaataaaccaagtggtgccattggaaggaaggtt
gtcgtgtcaacaaacatcgctgagacatccctgaccatcgatggcgtggtgtttgtaatt
gatcccggatttgccaagcaaaaggtatataacccacgtatccgagtggaatcccttttg
gttacagccatcagcaaggcctcggcccagcagagggccggtcgtgctgggcggacacgc
ccagggaagtgtttccgcctttacacagagaaggcttacaagacagaaatgcaggacaac
acgtatccagagattctgaggtctaatctgggctctgtggtgctgcagctgaagaaactg
gggattgatgacctggtgcactttgacttcatggacccaccagccccagagaccctgatg
cgagccctggagttgctgaactacctggcggcgctcaatgacggtggtgacctgacggag
ctgggctccatgatggcagagttccccctggacccccagctggccaagatggtcatcgcc
agctgtgaattcaactgttcaaacgagatcctctccatcactgccatgttgtcagtccca
cagtgcttcgtccgacccacggaggctaagaaggtggccgacgagtccaagatgcgcttt
gcccacatcgacggagaccacatgacgctgctcaacgtctaccacgcctttaaacaaaac
cacgactctactcagtggtgctatgaaaatttcgtcaactaccgctcgctgatgtcagca
gacaacgtacggcaacagttgtccaggatcatggaccgcttcaacctgccgaggaagagc
actgagttcagcagcagagactactacaccaacatccggcgtgcgctggtcactggcttc
ttcatgcagatcgctcacctggagcgcacaggccattacctgacggtgaaggataaccaa
gtcgtccagctgcacccatccactgtgctggaccacaagccggagtgggtgctttacaac
gagtttgtgctgaccaccaagaactacatccgcacgtgcaccgacatcaaaccagagtgg
ctggtgaaaattgccccgcagtactatgagatgggtaacttcccccagtgtgaagcaaag
agacagttggagcgtatcattgcaaaaatctcatccaaggaacacactcagtactaa
DBGET
integrated database retrieval system
