KEGG   Etheostoma cragini (Arkansas darter): 117962098
Entry
117962098         CDS       T07493                                 
Symbol
poln
Name
(RefSeq) DNA polymerase nu isoform X1
  KO
K16618  DNA polymerase nu [EC:2.7.7.7]
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117962098 (poln)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecra03400]
    117962098 (poln)
Enzymes [BR:ecra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     117962098 (poln)
DNA repair and recombination proteins [BR:ecra03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   A-family DNA polymerase
    117962098 (poln)
SSDB
Motif
Pfam: DNA_pol_A DNA_pol_P_Exo
Other DBs
NCBI-GeneID: 117962098
NCBI-ProteinID: XP_034757073
LinkDB
Position
19:complement(5899555..5952919)
AA seq 1514 aa
MAQSNGRLYSGPLSQAAQKILVVLRAQSGHAARRNHNYYDHRQIEERNNGSQWEPWAQSN
WSLSHQENKEGGTDRPQVPSFSTSYNDASNQWQISQTSACYQYSQTPDCSLSSQASSCWD
SSLQRQTSPTEAYYRCSQVYSHRKYSEPPACQSSQALSFTQHEETAASLSNRDRYTLSLQ
IPKKRYEHQATPWRSSTEEIRPHFILNLSPDKKDHDMALFPPTNYPDTHKAQPALACHQV
SSGLKISEETDNDTSGAQKKNRNAESWHIPRKKLDQSVGLDSLAKWKQPLFNPTKEVISG
EEDGGILYNQSEEGVQQIVDSENRGAANEEISDQGHEMQDAATGQETRHWDAPLPHEKGS
ASEMQGFQFLGTNENPSLERNLNLVYTSKMDKSFHCYSEVTKSWQKEHNDFDCIVNTHEI
KIEHSPSIDDKEISVGCLPCTPKKILTSSERGDHKWVHCQAESPQDVSQTVTETAEKDKT
ENPPSFLGDTTADNLERTKEEGIEVMEVGLEVQKESSAVVDSSIEVEIETEQHHCSDVQI
RESQCETDYRGVNELPGGDIEPGEKGGDRNEYVMPPVDSENASTSTEDLGRESSPTPPLS
QMCRAKRLKFRAPCLLGNHQHHDNVQTANGNVRGISSTEILASTCSFAAGQNSFSAQDLI
STTTKPSKKLGNSYLPTSETHSCHPLLIPSFPLKRKLEVLKRQYADPPKIYITGHPPKWE
PPYSSQEKAGEVGGIELKRAKPGTSIPELPAVNPKPQTEVSPLHKTGKVLGVHKDPHGPK
QVRQIQQSMLEGRCPKSARNTSKKTQSSATCKPLNRTKCGPDEGIHGAKLSHDEANGNES
QNQSKAGCLTATLTSDPRVKDSCKMNPDEKMQMLEELEKTKALVLTLVYRDGTTQLDLEQ
KLTQAVCGLLILMKNSLDRSTPEDTLGPNDSLVYLKLEHTPAWAQQHKRQSQELFTRDIL
LQVLSRSQLVVCYKAKDFLRTALQLYRQDLSWKQVAGCQIQDPQVSGWLLDPTNPSSCYP
DLLSKHNKRPHTTPALGTKKVSQVISGLYSLYCLNMKLCFKLQSQGLWELYSDLELNMIS
VLAAMESHHIYVDKEALKRTSDLLGAKMKQLEQEAHRAAGQIFMVTSNTQLRTVLFEKLC
LHKRCENKKLPKTINKQQQSTSEAALLQLQDLHPLPKIILEYRQVHKIKSTFVDGILSCM
MSKNYVSSTWYQTSSVTGRISAKHPNFQALPRQPLQITKKQYIEGKEEEVVTVHPRAMFI
PQEGWTFLAADFCQVELRLLAHLSSDPELLRIFTNPQADVFTMLASQWKGVSEGEVTSED
REHAKRIVYSVVYGAGRERLSGILGVSTEQASRFQDSFLQTYREVHAFIQRTIQQCHKQG
YVLSIMGRRRTFPNINAPDWGIRMQAERQAVNFVVQGSAADLCKMAMIRIFKLVSSSSSC
SARLIAQLHDELLYEVEDSQVEQFADLVRSTMESLQHIDHLGVHLKVPLKVAVSSGKSWG
SMSELNIPPMSPSL
NT seq 4545 nt   +upstreamnt  +downstreamnt
atggcgcagtctaacggcaggttgtattcagggcctctgtcccaggcggcacagaagatc
ctggttgttctgcgggcccagagtggacatgcagccagacgcaaccacaactactacgat
cacaggcaaatagaggagcggaataatggcagccagtgggagccgtgggctcagagcaac
tggagcttgagtcatcaagagaacaaagagggaggcacagaccggccccaggtgccctcc
ttttccacttcttacaatgacgcctctaaccaatggcagatctctcagacctcagcctgc
tatcagtactcacagacaccggactgctccctgtcatcccaggcctcctcctgctgggat
tcctcacttcaaaggcagacgtctccgactgaagcctattatcggtgctcacaggtttat
tcccacagaaagtactccgaaccccctgcttgccagtccagtcaggctctgtcattcact
cagcatgaggagacggcagcatctctctccaatagagacagatacaccctctccctccaa
ataccaaagaaacgttatgaacatcaagctacaccatggagaagctccactgaagaaatc
aggccacatttcatcctcaatctttctccagacaagaaggatcatgatatggctttgttc
cccccaaccaattaccctgatacccacaaagctcagcctgctttggcttgtcaccaagtt
tcttctggccttaaaataagtgaagagacagacaatgacacatcaggtgcacagaaaaaa
aacagaaatgcagagagctggcatatccccagaaagaagctagaccaatctgtaggtttg
gacagcctagcaaagtggaagcaacctctattcaaccccactaaagaggtcatcagtgga
gaagaagatgggggcatactatataaccaatcagaggaaggggttcagcaaatagtggat
tccgaaaataggggggcagctaatgaagaaatctcagaccaaggacatgaaatgcaggat
gcagcaactggtcaagagacaagacattgggatgcacccttgccacatgaaaaaggatca
gccagtgaaatgcaaggatttcagttcttgggaacaaatgagaaccctagtttagagaga
aatttgaacttggtatatacaagtaaaatggacaaaagcttccattgttattctgaggtt
acaaagtcttggcagaaagaacataatgactttgattgtatagttaatacacatgaaatc
aaaattgaacattcacctagcattgacgataaagagatttccgtgggatgtctaccgtgc
actccaaaaaagatcttgacatcttcagaaaggggagatcacaagtgggtccactgccaa
gctgaaagccctcaggatgtgagtcagactgtgactgaaacagcagagaaggacaagaca
gaaaacccaccatcattcctgggtgacaccactgctgataacctggagagaaccaaagag
gaaggaatagaagtaatggaggttggtttggaagtgcagaaagagagcagtgcagttgtt
gattcaagcattgaagttgaaattgagacagagcaacaccattgttctgatgtccaaata
agagaaagccagtgtgagacagattatagaggggtcaatgagttacctggaggagacatt
gagccaggagagaaggggggagatagaaatgagtatgtgatgccacctgtggacagcgaa
aatgcaagtacatctacagaggatttgggaagagaaagttctcccacgcccccattgtcc
cagatgtgcagggcaaaaaggttaaagttcagagctccctgtctccttgggaaccaccag
caccatgacaatgtacaaactgctaatggaaatgtcagagggatcagctcaaccgagata
ctggcctcaacatgcagttttgctgctggacaaaattctttctcagcacaagatttgatc
tcaactaccacaaaaccgagcaaaaagctgggaaacagctacctgcctacatctgaaact
cattcatgtcatcctctcctcatcccctccttccccttaaagaggaagcttgaagtactt
aagcgacaatatgctgaccctcctaaaatctacataaccggacatcctccaaaatgggag
cctccttattcctctcaagaaaaggcaggggaagtagggggaattgagctgaagagagcc
aagcctgggacctcaatccctgaacttccagctgtaaacccaaaaccacagactgaagtc
agtcctttacataaaacaggaaaagtgttaggggtacataaagacccacatggccccaag
caagttcgacaaatccagcaaagtatgctggaaggaaggtgccctaaatcagctaggaat
acttccaaaaagacccaatcttctgcgacctgcaaaccactcaaccggaccaaatgtggg
cctgatgagggaatacatggggcaaagttatcccacgatgaggctaatggtaatgagtcc
cagaaccaatccaaagctggctgtctgactgcgaccctgacgtctgatcctagagtaaag
gattcttgtaaaatgaacccagacgaaaagatgcaaatgcttgaggagttggaaaagacc
aaggcgctggtgctaaccttggtgtatcgagatggaacaactcagctagacctagaacag
aagctcactcaagcagtgtgtggccttctcatactgatgaagaacagtcttgaccgcagc
acaccagaggacacgctcgggccaaatgacagtctggtctacttaaaactagagcacaca
cctgcatgggcccagcaacacaaacgccagagccaggagctctttactagagatatattg
ctacaggttctatcaagatcccaactggtggtgtgctataaagccaaggatttccttcgt
acagctctgcagttgtacagacaagacctcagctggaaacaagtggcaggctgccaaatc
caggacccacaggtgtcagggtggcttctggatcctacaaatccgtcctcctgctacccg
gaccttctcagtaaacacaacaaaagaccccacacaacacctgccctgggtaccaagaag
gtttctcaggtcatctcaggtctctattcactctactgtcttaacatgaagctatgcttt
aaactacagagccaggggctgtgggagctgtactcagacttggagctcaacatgatctct
gttttggcagccatggagagccatcacatctatgtggacaaagaagctcttaagagaact
tcagacctgctgggggccaaaatgaagcagttggagcaggaggcccaccgagcagctgga
caaatattcatggtcaccagcaacactcaactacgaacagttctgtttgagaagctgtgc
ctccataagcgttgtgagaataagaaacttcccaagactatcaacaaacaacagcagtcg
acatccgaagctgcattgttgcagcttcaggacctgcaccctctgccaaagatcattcta
gagtacagacaggttcacaaaatcaaatccacttttgttgatgggattctctcatgcatg
atgagcaagaactacgtttcctctacatggtaccagacaagttcggtgacagggaggatc
tcagccaagcatccaaacttccaagccctcccaagacagccacttcaaatcaccaagaag
cagtacatcgaaggaaaggaggaggaggtggtgactgttcatcctcgggcaatgtttatc
cctcaggaaggatggacttttcttgctgcagacttctgccaggtggagctgcgtctgttg
gctcacctctcctctgaccctgagctgcttcgcattttcaccaacccacaggcggacgtc
tttaccatgttggcctctcagtggaaaggggtgagtgagggggaggtgacttctgaggat
cgggaacatgccaaacgcattgtctactctgttgtgtacggggcaggtcgtgagcgtctg
tcggggatcctcggtgtgagcactgagcaggccagccgattccaggacagcttcctgcag
acttacagagaagtccatgccttcatccagaggaccatccagcagtgccacaaacaaggg
tatgtgctctccatcatgggtcgtcgacgaaccttccctaacatcaacgcccccgattgg
ggcatccgcatgcaggctgagaggcaggcagtcaactttgtggtccaaggttcagctgct
gatctttgtaagatggccatgatcagaatcttcaagctggtctcctcctccagctcatgc
tccgccaggctgatagcacagctccatgatgagcttctgtatgaagtggaggactcccaa
gtggaacagtttgcagatctggtgaggagcaccatggagtcccttcagcacattgaccat
ctgggagtccatcttaaagtccccctgaaggtggcagtctccagtggcaagtcttgggga
tccatgtctgagcttaacatccctccaatgtcgccttctctttaa

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