Etheostoma cragini (Arkansas darter): 117962098
Help
Entry
117962098 CDS
T07493
Symbol
poln
Name
(RefSeq) DNA polymerase nu isoform X1
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117962098 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117962098 (poln)
Enzymes [BR:
ecra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117962098 (poln)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
117962098 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
117962098
NCBI-ProteinID:
XP_034757073
LinkDB
All DBs
Position
19:complement(5899555..5952919)
Genome browser
AA seq
1514 aa
AA seq
DB search
MAQSNGRLYSGPLSQAAQKILVVLRAQSGHAARRNHNYYDHRQIEERNNGSQWEPWAQSN
WSLSHQENKEGGTDRPQVPSFSTSYNDASNQWQISQTSACYQYSQTPDCSLSSQASSCWD
SSLQRQTSPTEAYYRCSQVYSHRKYSEPPACQSSQALSFTQHEETAASLSNRDRYTLSLQ
IPKKRYEHQATPWRSSTEEIRPHFILNLSPDKKDHDMALFPPTNYPDTHKAQPALACHQV
SSGLKISEETDNDTSGAQKKNRNAESWHIPRKKLDQSVGLDSLAKWKQPLFNPTKEVISG
EEDGGILYNQSEEGVQQIVDSENRGAANEEISDQGHEMQDAATGQETRHWDAPLPHEKGS
ASEMQGFQFLGTNENPSLERNLNLVYTSKMDKSFHCYSEVTKSWQKEHNDFDCIVNTHEI
KIEHSPSIDDKEISVGCLPCTPKKILTSSERGDHKWVHCQAESPQDVSQTVTETAEKDKT
ENPPSFLGDTTADNLERTKEEGIEVMEVGLEVQKESSAVVDSSIEVEIETEQHHCSDVQI
RESQCETDYRGVNELPGGDIEPGEKGGDRNEYVMPPVDSENASTSTEDLGRESSPTPPLS
QMCRAKRLKFRAPCLLGNHQHHDNVQTANGNVRGISSTEILASTCSFAAGQNSFSAQDLI
STTTKPSKKLGNSYLPTSETHSCHPLLIPSFPLKRKLEVLKRQYADPPKIYITGHPPKWE
PPYSSQEKAGEVGGIELKRAKPGTSIPELPAVNPKPQTEVSPLHKTGKVLGVHKDPHGPK
QVRQIQQSMLEGRCPKSARNTSKKTQSSATCKPLNRTKCGPDEGIHGAKLSHDEANGNES
QNQSKAGCLTATLTSDPRVKDSCKMNPDEKMQMLEELEKTKALVLTLVYRDGTTQLDLEQ
KLTQAVCGLLILMKNSLDRSTPEDTLGPNDSLVYLKLEHTPAWAQQHKRQSQELFTRDIL
LQVLSRSQLVVCYKAKDFLRTALQLYRQDLSWKQVAGCQIQDPQVSGWLLDPTNPSSCYP
DLLSKHNKRPHTTPALGTKKVSQVISGLYSLYCLNMKLCFKLQSQGLWELYSDLELNMIS
VLAAMESHHIYVDKEALKRTSDLLGAKMKQLEQEAHRAAGQIFMVTSNTQLRTVLFEKLC
LHKRCENKKLPKTINKQQQSTSEAALLQLQDLHPLPKIILEYRQVHKIKSTFVDGILSCM
MSKNYVSSTWYQTSSVTGRISAKHPNFQALPRQPLQITKKQYIEGKEEEVVTVHPRAMFI
PQEGWTFLAADFCQVELRLLAHLSSDPELLRIFTNPQADVFTMLASQWKGVSEGEVTSED
REHAKRIVYSVVYGAGRERLSGILGVSTEQASRFQDSFLQTYREVHAFIQRTIQQCHKQG
YVLSIMGRRRTFPNINAPDWGIRMQAERQAVNFVVQGSAADLCKMAMIRIFKLVSSSSSC
SARLIAQLHDELLYEVEDSQVEQFADLVRSTMESLQHIDHLGVHLKVPLKVAVSSGKSWG
SMSELNIPPMSPSL
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtctaacggcaggttgtattcagggcctctgtcccaggcggcacagaagatc
ctggttgttctgcgggcccagagtggacatgcagccagacgcaaccacaactactacgat
cacaggcaaatagaggagcggaataatggcagccagtgggagccgtgggctcagagcaac
tggagcttgagtcatcaagagaacaaagagggaggcacagaccggccccaggtgccctcc
ttttccacttcttacaatgacgcctctaaccaatggcagatctctcagacctcagcctgc
tatcagtactcacagacaccggactgctccctgtcatcccaggcctcctcctgctgggat
tcctcacttcaaaggcagacgtctccgactgaagcctattatcggtgctcacaggtttat
tcccacagaaagtactccgaaccccctgcttgccagtccagtcaggctctgtcattcact
cagcatgaggagacggcagcatctctctccaatagagacagatacaccctctccctccaa
ataccaaagaaacgttatgaacatcaagctacaccatggagaagctccactgaagaaatc
aggccacatttcatcctcaatctttctccagacaagaaggatcatgatatggctttgttc
cccccaaccaattaccctgatacccacaaagctcagcctgctttggcttgtcaccaagtt
tcttctggccttaaaataagtgaagagacagacaatgacacatcaggtgcacagaaaaaa
aacagaaatgcagagagctggcatatccccagaaagaagctagaccaatctgtaggtttg
gacagcctagcaaagtggaagcaacctctattcaaccccactaaagaggtcatcagtgga
gaagaagatgggggcatactatataaccaatcagaggaaggggttcagcaaatagtggat
tccgaaaataggggggcagctaatgaagaaatctcagaccaaggacatgaaatgcaggat
gcagcaactggtcaagagacaagacattgggatgcacccttgccacatgaaaaaggatca
gccagtgaaatgcaaggatttcagttcttgggaacaaatgagaaccctagtttagagaga
aatttgaacttggtatatacaagtaaaatggacaaaagcttccattgttattctgaggtt
acaaagtcttggcagaaagaacataatgactttgattgtatagttaatacacatgaaatc
aaaattgaacattcacctagcattgacgataaagagatttccgtgggatgtctaccgtgc
actccaaaaaagatcttgacatcttcagaaaggggagatcacaagtgggtccactgccaa
gctgaaagccctcaggatgtgagtcagactgtgactgaaacagcagagaaggacaagaca
gaaaacccaccatcattcctgggtgacaccactgctgataacctggagagaaccaaagag
gaaggaatagaagtaatggaggttggtttggaagtgcagaaagagagcagtgcagttgtt
gattcaagcattgaagttgaaattgagacagagcaacaccattgttctgatgtccaaata
agagaaagccagtgtgagacagattatagaggggtcaatgagttacctggaggagacatt
gagccaggagagaaggggggagatagaaatgagtatgtgatgccacctgtggacagcgaa
aatgcaagtacatctacagaggatttgggaagagaaagttctcccacgcccccattgtcc
cagatgtgcagggcaaaaaggttaaagttcagagctccctgtctccttgggaaccaccag
caccatgacaatgtacaaactgctaatggaaatgtcagagggatcagctcaaccgagata
ctggcctcaacatgcagttttgctgctggacaaaattctttctcagcacaagatttgatc
tcaactaccacaaaaccgagcaaaaagctgggaaacagctacctgcctacatctgaaact
cattcatgtcatcctctcctcatcccctccttccccttaaagaggaagcttgaagtactt
aagcgacaatatgctgaccctcctaaaatctacataaccggacatcctccaaaatgggag
cctccttattcctctcaagaaaaggcaggggaagtagggggaattgagctgaagagagcc
aagcctgggacctcaatccctgaacttccagctgtaaacccaaaaccacagactgaagtc
agtcctttacataaaacaggaaaagtgttaggggtacataaagacccacatggccccaag
caagttcgacaaatccagcaaagtatgctggaaggaaggtgccctaaatcagctaggaat
acttccaaaaagacccaatcttctgcgacctgcaaaccactcaaccggaccaaatgtggg
cctgatgagggaatacatggggcaaagttatcccacgatgaggctaatggtaatgagtcc
cagaaccaatccaaagctggctgtctgactgcgaccctgacgtctgatcctagagtaaag
gattcttgtaaaatgaacccagacgaaaagatgcaaatgcttgaggagttggaaaagacc
aaggcgctggtgctaaccttggtgtatcgagatggaacaactcagctagacctagaacag
aagctcactcaagcagtgtgtggccttctcatactgatgaagaacagtcttgaccgcagc
acaccagaggacacgctcgggccaaatgacagtctggtctacttaaaactagagcacaca
cctgcatgggcccagcaacacaaacgccagagccaggagctctttactagagatatattg
ctacaggttctatcaagatcccaactggtggtgtgctataaagccaaggatttccttcgt
acagctctgcagttgtacagacaagacctcagctggaaacaagtggcaggctgccaaatc
caggacccacaggtgtcagggtggcttctggatcctacaaatccgtcctcctgctacccg
gaccttctcagtaaacacaacaaaagaccccacacaacacctgccctgggtaccaagaag
gtttctcaggtcatctcaggtctctattcactctactgtcttaacatgaagctatgcttt
aaactacagagccaggggctgtgggagctgtactcagacttggagctcaacatgatctct
gttttggcagccatggagagccatcacatctatgtggacaaagaagctcttaagagaact
tcagacctgctgggggccaaaatgaagcagttggagcaggaggcccaccgagcagctgga
caaatattcatggtcaccagcaacactcaactacgaacagttctgtttgagaagctgtgc
ctccataagcgttgtgagaataagaaacttcccaagactatcaacaaacaacagcagtcg
acatccgaagctgcattgttgcagcttcaggacctgcaccctctgccaaagatcattcta
gagtacagacaggttcacaaaatcaaatccacttttgttgatgggattctctcatgcatg
atgagcaagaactacgtttcctctacatggtaccagacaagttcggtgacagggaggatc
tcagccaagcatccaaacttccaagccctcccaagacagccacttcaaatcaccaagaag
cagtacatcgaaggaaaggaggaggaggtggtgactgttcatcctcgggcaatgtttatc
cctcaggaaggatggacttttcttgctgcagacttctgccaggtggagctgcgtctgttg
gctcacctctcctctgaccctgagctgcttcgcattttcaccaacccacaggcggacgtc
tttaccatgttggcctctcagtggaaaggggtgagtgagggggaggtgacttctgaggat
cgggaacatgccaaacgcattgtctactctgttgtgtacggggcaggtcgtgagcgtctg
tcggggatcctcggtgtgagcactgagcaggccagccgattccaggacagcttcctgcag
acttacagagaagtccatgccttcatccagaggaccatccagcagtgccacaaacaaggg
tatgtgctctccatcatgggtcgtcgacgaaccttccctaacatcaacgcccccgattgg
ggcatccgcatgcaggctgagaggcaggcagtcaactttgtggtccaaggttcagctgct
gatctttgtaagatggccatgatcagaatcttcaagctggtctcctcctccagctcatgc
tccgccaggctgatagcacagctccatgatgagcttctgtatgaagtggaggactcccaa
gtggaacagtttgcagatctggtgaggagcaccatggagtcccttcagcacattgaccat
ctgggagtccatcttaaagtccccctgaaggtggcagtctccagtggcaagtcttgggga
tccatgtctgagcttaacatccctccaatgtcgccttctctttaa
DBGET
integrated database retrieval system