Etheostoma cragini (Arkansas darter): 117962126
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Entry
117962126 CDS
T07493
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117962126
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117962126
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117962126
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Gene cluster
GFIT
Motif
Pfam:
CLZ
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
117962126
NCBI-ProteinID:
XP_034757128
LinkDB
All DBs
Position
19:complement(322928..328783)
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AA seq
469 aa
AA seq
DB search
MCVCAGYLEQGLLVKDEQKLRERYMVSFQFKLDLISMVPTDLLYFVFGLRYPEIRLNKLF
RFNRMLEFFQRTETRTNYPNALRISNLIMYIVIIIHWNACLYYSFSKAIGFGADRFVYPD
PSDPEFGRLIRKYAYSMYWSTLTLTTIGETPPPLENSEYIFVVTDFLVGVLIFATIVGNV
GSMITNMNAARATFQARIDAIKQYMTFRKVTKDLEKRVIKWFDFLWTNKKAVDEREVLKY
LPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREM
YIIKEGKLAVVADDGIKQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLFCL
SKDDLMQALTEYPDAKALLEEKGRQILMKDGLLDLEVAAQGPDPKEMEEKVDRMTGELDA
LQHRYARLLAEHEATQGKLKHRVTRLEKKLRPPPPPPPPGAPPPPEAEA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtgtgcaggttatctggagcagggtttgctggtgaaggacgagcagaagcta
cgcgagcgctacatggttagcttccagttcaaactggacctgatctccatggttcccaca
gacctgctgtacttcgtctttggactcagatacccagaaatccgcctcaacaagctgttc
aggttcaacaggatgctggaatttttccagcggacggagaccaggaccaactaccccaac
gctctgcgtatctccaacctcatcatgtacatcgtcatcatcatccactggaacgcctgc
ctctactactccttctccaaggccattggtttcggagccgacaggtttgtgtatcccgac
ccgtcggatccagagtttggccgtctgattaggaagtacgcctacagcatgtactggtcc
acgctaacgctcaccaccattggagagactccgccccccttggagaactccgagtatatc
tttgtcgtcacggacttcctggtgggcgtgttgatcttcgctacaatcgtcggtaacgtt
ggttcgatgatcaccaacatgaacgctgccagagcaacgttccaggctcgcatcgacgcc
atcaaacagtacatgaccttccgaaaggtaactaaggatctggagaagcgagtgatcaag
tggtttgacttcctgtggaccaataagaaagccgtggacgagagggaggtgttgaagtat
ctgccggacaaactgagagccgagatcgccattaacgtccacctggacacgctcaagaag
gtccggatctttgcggactgcgaggcggggctgctggtggagctggtgctgaagctgcag
ccgcaggtctacagccctggagactacatctgcaagaagggcgacatcggcagggagatg
tacatcatcaaggaggggaaactggccgttgtcgccgacgacggcatcaagcagtttgtc
gtcctgagcgacggaagctactttggagagatcagcatcctggctatcaaaggaagtaaa
gcagggaaccggcggactgcgaatatccggagcatcggctactcggacctgttctgcctg
tccaaagacgacctgatgcaggcgctgacggagtaccccgacgccaaggctctgctggag
gagaaggggcggcagatcctcatgaaggacggcctgctggacctggaggtggcggcgcag
ggccccgaccccaaagagatggaggagaaggtggaccggatgacgggcgagctggacgcc
ctgcagcaccgctacgcccggctgctggccgagcacgaggccacgcaggggaaactcaag
caccgtgttacccggctggagaagaagctccgccccccgccgccgccaccgccgccgggg
gccccgcccccgcccgaggccgaggcatag
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