Etheostoma cragini (Arkansas darter): 117962133
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Entry
117962133 CDS
T07493
Name
(RefSeq) C-type lectin domain family 10 member A-like
KO
K06721
C-type lectin domain family 10 member A
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ecra04054
]
117962133
04090 CD molecules [BR:
ecra04090
]
117962133
04091 Lectins [BR:
ecra04091
]
117962133
Pattern recognition receptors [BR:
ecra04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
117962133
CD molecules [BR:
ecra04090
]
Proteins
117962133
Lectins [BR:
ecra04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
117962133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Lectin_N
DUF948
TolA_bind_tri
VPS51_Exo84_N
Laminin_II
DUF4094
UL45
Mce4_CUP1
DUF16
DUF1664
Motif
Other DBs
NCBI-GeneID:
117962133
NCBI-ProteinID:
XP_034757138
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Position
19:4892..8376
Genome browser
AA seq
277 aa
AA seq
DB search
MTTTEYRDIEDDSSSFWNKEPAPVSLSAVSRFRRWLFPALTATFILVLIIVLGASNTQTS
NRLWSLEKTVSNVNESLSSVQQLAKDAAKDVNRLKFSVENNKDQLISVGEALKQLSVVDS
LSQTVASLKCSLERIINNSSAVEGCCPLDWLPFGSSCYLFSKTSASWPRARDWCNGHEAH
LVIPITDEDWNFVIRQAGGVFHWVGLTDEKGEWEWVNQTPYVMNRRRWMPGQPDSWTGHG
FGPGDEDCAHIHTDGRLNDLHCSTRLRYICQKHRLRS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactgaataccgcgacattgaagatgacagcagctccttttggaacaaagag
ccagcacctgtctctctctcagctgtctccaggttcagacgctggttgtttcctgctctg
acggctacattcatcctggttctgatcatagtactgggagctagcaacacacagacctct
aaccgactctggtctctggagaaaactgtttccaacgtgaacgaatccctgagctcagta
cagcagctcgcaaaagacgcagctaaagacgttaaccgcctcaagttttcagtggagaac
aacaaggatcagctgatctcagtgggcgaggcgttgaagcagctgtctgtcgtcgactcc
ctcagccagaccgtcgcctcgctgaaatgttccctcgaacgaatcatcaacaacagctca
gcagtggagggctgttgtcctctggactggctgcccttcggctccagctgttatctgttc
agcaagacgtccgcatcctggccccgagccagagattggtgcaacggacacgaagcacac
ctggtcattcccatcaccgacgaggattggaactttgtgatccgtcaggcgggcggcgtc
ttccactgggtgggtctgactgatgagaagggggagtgggagtgggtcaaccagaccccg
tacgtcatgaaccgaaggcgctggatgccggggcagccggacagctggaccgggcacggg
ttcgggcccggggacgaggactgcgcccacatacacaccgacgggcgcctcaacgacctg
cactgctccaccaggctgcgctacatctgccagaaacaccgcctgcgcagctga
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