Etheostoma cragini (Arkansas darter): 117962146
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Entry
117962146 CDS
T07493
Name
(RefSeq) fibrinogen alpha chain-like
KO
K03903
fibrinogen alpha chain
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117962146
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117962146
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117962146
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117962146
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117962146
Hyaluronan
Extracellular matrix or blood plasma proteins
117962146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
117962146
NCBI-ProteinID:
XP_034757154
LinkDB
All DBs
Position
19:556935..565682
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AA seq
685 aa
AA seq
DB search
MERLNVLVCLGLVFAASTLAQVVDPRGARPVEQGTRSETCATERDWPFCSDDDWGAKCPS
GCRILGLLNKYDHGAMKKIEKIRGLLDLNKAKHRSADQVSKQTYDYLKDRLTINSDNDNS
YYNLAQTLRQRITDIKIKIDRQLRILGALKDRVKDQVVDMQRLEVDIDIKLRSCKGSCQS
YTVYQLDRESYVELEKQVSQLDALSAQSIESVGTLSVMKSRPLQGVIVDSIYKSKDVGGG
QQREDMFPEVRTVQLVLEQEGSSSSSPATISKVPGSSFTPSTSSSSSSSSSSSSSKSITE
LGGRGDDVFGTGVGQTGTSHVSSKTVSCTRSTRRTVVHTKSGPVEKVEEVFEGGPECSAM
TDLTKGGMGALFPSLGHTSSSSSSSSSSSSSVTKTVHTGGAKGSLLDTKTEFGNPFVTHE
YNLFDTGLDLGLFDTGAAEDDLPDIHARSVKSVVTERRADYVGKDCVEAHQNHLNGESNG
LFKIKPGGAASAQAAQEVYCQQAGLMGGWLLAQQRQSGALGFNRTWAEYRGGFGSVDAAG
NGEFWLGNQNLHLLTSQGESMLRVELEDWEGGVASAEYTVRVGAEAEGYPLHVSGYTGDA
GDALAPSHDGMKFSTFDRDNDLWGGSCAGRHGGGWWYNKCQTANLNGVYYKGAKNEPENG
VVWATYKPANYSLKTARMFIRPAAF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggagcgactcaacgtactcgtctgtctcgggttggtttttgcagcttcaactctggcc
caggtggtcgaccccagaggcgcccgaccggtggagcaaggcaccagatctgagacctgt
gccacggagagggactggcctttctgctcagacgacgactggggcgccaaatgcccgtcg
ggctgcaggatcctgggactgctgaataaatacgaccacggggcgatgaagaagatcgag
aagatccgcggcctcctggacctgaacaaggccaagcaccgctccgcagaccaggtctcc
aagcagacctacgactacctgaaggacagactcaccatcaactctgataacgacaacagc
tactacaacctggcccagacgctgcgtcagaggatcacagacataaagatcaagatcgac
cgacagctgaggatcctgggggccctgaaggaccgggtcaaggaccaggtggtggacatg
cagaggctggaggtggacattgatattaagctccgatcctgcaaaggatcctgccaaagc
tacaccgtgtaccagctggaccgggagagctacgtggagctggagaaacaggtcagccag
ctggacgccctgtcggcccagagcatcgagtccgtggggaccctgtccgtgatgaagagc
cggcccctgcagggcgtcatcgtggacagcatctacaagtccaaggatgtcggcggagga
cagcagcgggaagacatgttccccgaggtgaggacggtccagttggtcctggaacaggag
ggctccagctcctcgtccccagcaaccatctccaaggtcccaggtagttccttcactccg
tccacatcctcctcttcttcctcctcctcctcctcctcttcctctaaatccatcaccgag
ctcgggggacgcggcgacgacgtcttcggcacgggggtcggccagaccggcacgagccac
gttagcagcaaaaccgtctcctgcacccgcagcacccgccgcaccgtggtccacaccaag
agcggcccggtggagaaggtggaggaggtgttcgaggggggccccgagtgctcggccatg
acggacctcaccaagggagggatgggcgccctcttccccagcctcggccacacctcctcc
tcttcctcctcctcctcctcatcctcgtcttctgtgaccaagacggtccacaccggcggc
gccaaggggagcctcctggacaccaaaaccgagtttgggaacccgttcgtaactcatgaa
tataatttattcgacacagggctcgaccttggcttgttcgacacgggcgccgcggaggac
gaccttcctgacatccacgcccggagtgtgaagagcgtcgttaccgagcgccgagccgat
tatgtaggaaaagattgtgtcgaggcccaccagaaccacctgaacggggaatcaaacggc
ctgtttaagatcaaacccggcggcgccgcctcggcacaggcggcgcaggaggtttactgc
cagcaggcggggctaatgggcgggtggttgttagcgcagcagaggcagagcggcgcgctc
ggcttcaaccgcacctgggccgagtaccgcggcgggtttggctcggtcgacgccgccggc
aacggggagttctggctgggcaaccagaacctccacctgctgaccagtcagggggagagc
atgctgagggtggagctggaggactgggaagggggcgtggccagcgccgagtacacggtc
agggtcggcgccgaggcggaggggtacccgctgcacgtgtccggttacaccggggacgcc
ggtgacgctctggcgccgtcccacgacgggatgaagttcagcacctttgaccgggataac
gacctctggggggggagctgcgccgggcgccacggcggcgggtggtggtacaacaaatgc
cagacggcgaatttgaacggggtttattataaaggagcgaaaaacgagcctgaaaacgga
gtcgtgtgggcgacgtataaaccggccaattacagcctgaagacggcaaggatgttcatc
cgccccgctgcgttttaa
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integrated database retrieval system
