Etheostoma cragini (Arkansas darter): 117962241
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Entry
117962241 CDS
T07493
Symbol
si:dkey-185m8.2
Name
(RefSeq) trichohyalin isoform X1
Organism
ecra
Etheostoma cragini (Arkansas darter)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIG1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117962241
NCBI-ProteinID:
XP_034757310
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All DBs
Position
19:5610670..5618831
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AA seq
2101 aa
AA seq
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MDVTYEKCCPVIVTNGDYPVRCTEEVLLHFFTDESLQAAMDSQHPPASRSTPPALPELRL
VLLGRKGAGKSAAGNTILGGVGGFESGKPTEECVKRRADVEGRKVTVVDTPGWEWYYPLN
STPNWVRRETLRSVSLCPSGPHAVLLVVRSCASVTDDYISEIEEHLEPLGKAVWEHTMLL
FTRGDELGLASMEQRILTSGPALHRLLQKCENRYHVLDNRSKGDGTQVKELIRKLEEMVE
RKMNGSSHLEMDNTVLVGLEADRKRRARERRKKQRQMEMQMQRGTIKAALMSDGLQGSEL
DARQSFSKIPRRLTEVRLVLLGERETGKSSAGNTILGKMGSFQAGAVTEECVCQQAEVAM
RLVTVVDTPGWEGGVAGATPERVKREIVSSVSLCPPGPHALLLSLRVDTLVRAAHVREHL
ELLGEGVWRHTILLFTHGDQLREGVDIEQHIQGGGRDLQLLLEKCRGRYHVISSLDAGGR
GSEGSNGVTDLLQKIEKMAAVNRCEAFSGLVQEVIDLSQHRNEKFNQRLKDMGDKMLRQE
EELKNIRDREMKRIRWFFDRKKKGKSSGKSDTQREEEEEENRRLGERKNDGEVEGELEEK
MRWLTEDKEREIQDLSTENERIHVALTQSRRERDETMLRLEVKERETEELKERIDEQQLK
LLDLERASVANEYERKQREDTIKAKKQEWLSEVKKLENNIELLKKEKAEWMEKVDSLKVE
MDETKIHIDDMFQRKEQERKREMEDMEVKLLEKHKELEKTRKNASEEKQIAQAILKQYEE
ATERKVGEIKSQHRKEMLDKEAEIQGIQLQHQEAMGRKIREIEKLMETMKVQHQEEIDQK
FKDNAEMLERLKQKQDNEMKETQKENQRMIANLKEQFAKETEEEMQVKKREIAELMQRFL
AQTEEKMLENEKEKEMINLTYKKDMVQKMQEKEKEVAVLKLQHQEEMARKMNEMEKLMEM
RDAEHKEEIDKKVKAEEEAVEKVKQQYSHKIRDSEYETQRQIKELKQQFAEEIEKQLEER
QRQIGELEQKHIAQTEEKALENEKKEKVMNENYEKYILQQMHEREELIEKLKYQHINEIR
ETMQESDKEKERLVMNLKKEMEQRLQEKEKEIDEIKGNVKEMKEQLQQKEEKELDHLNYK
HEMEHTVREKEKEIEGMKLNVKELNKKLQQNKEKEMDYLNDKQGMEQRLEERQREADMIK
EHLKEILNHKKQMEQKLQEKERMIEKLDQHVKDVDEILRRKEEERGEIILNQKKEAEQRL
QDREREMEEMKLQLLNNMERKLKEKETEIESVKQQADSREMGWREELRKGENELSRLLNI
IDNKTNEIAQAECLFADRDSKIDEAKKTCANYLQEIEELKECNKNQTSSIMELQQNHAEQ
DRKKDAEMMAKLQEKEEELKQRERENEKETIQLKLTIEQTKTELKELISKMDKEMTSMIQ
NYEKEIVERNESMESIAKEKEWAIGRSEEGRRRVEELQEQNEKLRKETDNLKIKCEELKT
ESEEVRKDLRGCEQQVKSKEAEIQEILRERDVGVGELKEANDKLQVVIERMKERTGEAER
QMNELRVNVQKESEFRTKVDEFLKREKEIEEREQDLNRNKEELSKRGHELDAKEKELVEK
EVKLESKGEELCKWEERQQKEQEDKDKYEHDMSVRVQNIKKKEQELESLLRALEGKQKEL
SYHGQDLQEKVKGQKDHGKELKDKEYYLRNEERELLNWKTELQMQNERVNSTTQQLDEMG
RDLALLKEQLHNKENNLKELFKKLGKWEQNLKEREEGLLKSENGEYEVGYNMGVHEEDSF
DLTAVAESSEDDLHLLCREVSKRRGEGKGTESYRGEKDREDQRTKTASSAAESNNCHLET
MKEMDMAEEKEEMRGRGEETRNVKSREDLERAKVIQKIEFLSECQGHRSSNNKDLPGSGL
RVVVLGESWSSRSPAGVTILCGQKFKHDGATFRPWRGQVGRRQLTVAEPLGLKWRDGPDL
TNATQRKSILDSISWCHPGPHVVLLLIPAFLTCTQKYRRAIEEHMSLFGEDIWQRTLVLF
TWGEMLGESAEQHILRNGELVGLVERCGGRYHVLGSKKSHSLIERLFEKMEDMVTVNGRE
L
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgacatatgagaagtgttgtccagtcatcgtcacgaatggtgattatccggta
cggtgcactgaggaagtacttctccatttcttcacagatgaaagtctgcaggccgccatg
gactcacaacacccccctgcctcccgcagcaccccaccggctctcccagagcttagactg
gtcctcctgggcaggaaaggagcaggaaagagtgcggcgggcaacaccatcctgggagga
gtagggggctttgagagcgggaagcccacagaagagtgtgtgaaaaggcgagctgatgtg
gaagggaggaaagtcacagtggtagacaccccagggtgggagtggtactacccgctcaac
agcacccccaactgggtgaggagggagactttacggagtgtgtcgctttgcccctctgga
ccccatgctgtgctgcttgtggtgcgatcctgcgcctcagtaacagatgactacatcagt
gagatagaggaacacctggagccgctgggaaaagcagtttgggagcacaccatgttgctg
tttacccggggagacgagctaggcctggcgtcaatggagcaacgaatcctgactagtggc
ccggcactccataggctcctccaaaagtgtgaaaaccgataccatgtcctggacaaccgg
agcaaaggagatgggactcaggttaaagagctgataaggaagctggaggagatggtggag
aggaaaatgaatggcagcagtcatttagagatggacaatacggtcctggtgggtctggag
gcagacaggaagcggagagcaagggagaggaggaagaaacagaggcagatggagatgcag
atgcagagagggaccatcaaagctgctctaatgagtgatggtcttcagggttcagagcta
gacgcccggcagtcattctccaagatcccccgacgtctaactgaggtcaggctggttctc
ctcggcgagcgtgaaacaggaaagagctctgccgggaacaccattctgggcaaaatgggc
tccttccaggccggggcagtgacagaggagtgcgtctgtcagcaagcggaggtggccatg
cggctggtgacggtggtggacactcccggctgggagggaggtgtggcgggggcaacacct
gagagggtgaagagggagattgtcagcagtgtgtccttgtgtcctccagggccacatgcg
cttctgctgagtctgagggtagatacactggtgagagcagcacatgtgagggaacatctg
gagcttctgggcgagggtgtatggagacacacaatattgctgttcacccatggggatcag
cttagggaaggggtggatattgagcagcacatccagggtgggggcagggatctccagttg
ctgctggaaaagtgcaggggcaggtaccacgtaatcagcagcctagatgcaggaggaaga
ggaagtgaaggctccaatggggtgacggatctcctgcagaagatagaaaagatggcggcg
gtgaacagatgtgaggcattttccggcctagttcaggaggtcatagatctgagccagcac
aggaatgagaagttcaaccagcggctgaaggacatgggagataaaatgcttcgccaggag
gaggagttgaaaaatattagagatagggagatgaaaagaatcaggtggttttttgacaga
aagaagaaggggaaatcatccggaaaatccgacactcaaagggaggaagaggaggaagag
aacaggaggttgggagaaaggaagaatgatggggaagttgagggggagctggaagagaag
atgcgatggctgacggaggataaagagagagaaattcaggatctgagcacagaaaatgag
agaatccatgtggcgctaacccagagcagacgagaaagggacgagacgatgctcaggttg
gaggtaaaagagagagagacagaggagctgaaagaaagaattgacgagcagcaactgaag
ctgctggaccttgagcgtgccagtgtagcaaatgaatatgagagaaaacagagggaggat
accatcaaagcaaaaaagcaagagtggttgagtgaggttaagaaattggaaaacaacata
gagctgctaaagaaagagaaagcagagtggatggaaaaagttgattctttaaaagtagaa
atggatgagactaaaatacatattgatgatatgttccagaggaaagaacaagaaagaaaa
agggagatggaagatatggaagtcaaactacttgaaaaacacaaagagctggaaaaaact
aggaagaacgcctcagaggaaaagcagatagctcaagccattttaaaacaatatgaagaa
gctacagaaaggaaagttggagagataaaatcacaacataggaaagagatgcttgacaaa
gaggcagagatacaaggcatacaactgcagcatcaggaagcgatgggcagaaaaatcaga
gaaatagaaaaattgatggagacaatgaaagttcaacaccaagaagaaattgatcaaaag
tttaaagacaatgcagaaatgctggaaagactcaaacagaagcaagacaatgaaatgaag
gaaacacagaaagaaaaccaaagaatgattgccaacctgaaagagcagtttgcaaaagaa
acagaggaagaaatgcaagtaaaaaagagagagatagcagagttaatgcagaggtttctt
gcccaaacagaagaaaaaatgctggaaaatgaaaaagagaaggaaatgattaatcttacc
tacaaaaaagacatggtgcagaagatgcaagagaaagaaaaagaggtagcagtgttaaaa
ctgcagcatcaggaagaaatggcaagaaaaatgaatgaaatggaaaaactaatggagatg
agggacgcggaacacaaggaggaaattgataaaaaagtgaaagcggaagaggaagctgtg
gaaaaggtcaaacagcagtacagtcacaaaataagagactctgagtacgaaacacaacgg
cagattaaagagctgaaacaacagtttgcagaagaaattgagaaacaattggaggagaga
caaagacagataggagagttggagcaaaagcacatcgcccagacagaggaaaaggcacta
gaaaatgaaaaaaaggagaaagtgatgaatgaaaactatgaaaaatacattttgcaacaa
atgcacgagagagaggaactaatcgagaagttaaaatatcaacacattaatgaaatcaga
gaaacgatgcaagaaagtgacaaagaaaaggaaagacttgttatgaatctcaagaaagag
atggagcaaagactgcaggaaaaggagaaagagatagatgagatcaaaggaaatgtgaaa
gaaatgaaggaacagctgcaacaaaaggaagagaaagaactagatcatttaaattacaag
cacgaaatggagcacacagtgagagaaaaagaaaaagaaattgaggggatgaagctcaat
gtcaaagaattgaataaaaagctgcaacaaaataaagagaaagaaatggattatttaaat
gacaagcaaggcatggagcaaagactggaggaaagacaaagagaagctgacatgataaaa
gaacatttaaaagaaattttaaaccacaagaaacagatggagcaaaaactccaagaaaaa
gaaagaatgatagaaaaattggatcagcatgtaaaggatgttgacgaaatcctgcggaga
aaggaagaggagagaggagaaattattctcaatcaaaagaaagaggcagagcagcgactg
caagacagagagcgagagatggaggagatgaaactgcagcttttaaataacatggagaga
aaactcaaagaaaaagaaactgagattgaaagtgttaaacaacaggccgactcacgggag
atgggatggagggaagagctgaggaagggagaaaatgagttgagccgactgttaaatatc
attgacaataaaacaaatgaaatagcacaagcggaatgcctttttgcagacagagacagt
aagattgatgaggcaaaaaagacatgtgcaaactacttgcaagaaattgaagagctaaaa
gaatgcaataaaaaccaaacatccagtatcatggaactacagcaaaatcatgcagagcag
gatagaaaaaaagacgctgaaatgatggcaaaacttcaggagaaagaagaagaactgaag
cagagagagagagaaaacgagaaagagaccatccaactgaagctaacaatcgagcagaca
aagactgagctgaaggagctcatcagcaagatggacaaggagatgacgagcatgattcag
aattacgaaaaggagattgtggaaaggaatgagagcatggaatccatcgcaaaggagaag
gagtgggctataggtcgttcggaggaaggtcggaggagagttgaggagttgcaggagcaa
aatgagaagttgagaaaagagacggacaacctcaaaataaagtgtgaggagctgaaaacg
gagagcgaagaagttagaaaagatctcaggggatgtgaacagcaggtgaagagcaaagaa
gcagagatacaagaaattcttagggagagagatgtgggggttggagaattaaaggaggca
aatgacaaactacaggtagtgatagaaagaatgaaagagagaacaggtgaggcagaaagg
cagatgaatgagttgagagtaaatgtccagaaagaaagtgagtttagaacgaaggttgat
gaattcttaaaaagggaaaaagaaatagaggaaagggaacaggatctgaacagaaacaaa
gaagagctgagcaaacgaggacatgaacttgatgcaaaagagaaggagcttgttgaaaaa
gaggtcaagttggaaagcaagggagaagaactttgcaaatgggaagaaaggcaacaaaaa
gagcaggaagacaaagataaatacgagcatgatatgagtgtgagggtgcaaaatatcaag
aaaaaggaacaggagctagagagcttgctaagagctctggaaggcaaacagaaagagcta
agctatcatggtcaagatcttcaggagaaggtaaaagggcagaaagatcacgggaaggag
ctgaaagacaaagagtattacctaagaaacgaagagcgggagttactcaactggaagaca
gagttgcaaatgcaaaatgagcgtgtaaactctacaacgcagcagttagatgagatgggg
agagacttggctctgctgaaggaacaacttcacaacaaagagaacaatttaaaggagtta
tttaagaaattgggaaaatgggaacagaatcttaaagaacgggaagaagggttgctcaaa
agcgagaatggagaatatgaggttggttacaatatgggagtccatgaggaggattctttt
gatctgacagctgtagctgagagctcagaagatgacttgcatttattgtgccgagaggtc
agtaagagaaggggagaaggaaaaggaacagagtcatatagaggagaaaaggatagggag
gatcagaggacgaaaacagcatcgtcggccgccgagagcaataactgtcaccttgaaaca
atgaaagagatggatatggccgaggaaaaggaagagatgagaggaagaggagaggagacg
aggaatgtaaaaagcagagaggatctggaaagggcaaaggtcattcaaaagattgagttt
ttatctgaatgtcagggtcacagaagctcaaacaacaaagaccttcccggttcgggtttg
agggtggtggtgttaggggagtcctggtcgtctcgctcccccgctggagtcaccatcctg
tgtggacagaaattcaaacacgacggggctaccttcaggccctggagaggtcaagtaggc
agacgccaacttacagtcgcagaaccgctcggtctaaagtggcgagacgggccggatctg
accaacgcaacgcaaaggaaaagcatcctcgacagcatctcctggtgtcaccctggacct
cacgtcgtcctcctgctcattcccgccttcctcacctgcacacagaagtacaggagagca
atagaggagcacatgagtttgttcggagaggacatttggcagcggacgctggtgctgttc
acatggggggaaatgttaggggagagcgcagagcagcacatcctgaggaacggggagctg
gtggggctcgtagagagatgtgggggcaggtatcatgtgcttggcagcaaaaaaagtcac
tctttgattgagagattgtttgagaagatggaagatatggtgactgtgaatggcagagaa
ctgtga
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integrated database retrieval system
