Escherichia coli O157 H7 Sakai (EHEC): ECs_0059
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Entry
ECs_0059 CDS
T00048
Symbol
lptD
Name
(RefSeq) LPS assembly OM complex LptDE beta-barrel component
KO
K04744
LPS-assembly protein
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecs02000
]
ECs_0059 (lptD)
Transporters [BR:
ecs02000
]
Other transporters
Pores ion channels [TC:
1
]
ECs_0059 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
YfaZ
Motif
Other DBs
NCBI-GeneID:
913459
NCBI-ProteinID:
NP_308086
UniProt:
Q8XA13
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Position
complement(59731..62085)
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AA seq
784 aa
AA seq
DB search
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINANHAK
GDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILK
GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTW
SVVGSEIIHDREEQVAEIWNARFKVGPVSIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNY
FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYED
EHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFS
VGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNT
RDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNR
VMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGL
FRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWEND
DKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYAS
PEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQ
YSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPY
QNTL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgtatccccactctcctggccaccatgattgccaccgccctttatagtcaa
cagggactggcagccgacctcgcctcacagtgcatgttgggcgtgccaagctatgaccgt
cctctggtacagggcgataccaatgacttacccgtgactatcaatgctaaccacgcgaaa
ggggactacccggatgacgccgtgtttactggcagcgtggatatcatgcagggtaacagc
cgtctgcaggccgacgaagtgcagctccatcaaaaagaggcaccaggacaaccggagccg
gtacgtaccgttgatgcgctcggtaatgtccattacgacgataaccaggtgatcctcaaa
gggccgaaaggctgggcgaatctgaacaccaaagataccaacgtctgggaaggtgattac
cagatggtgggtcgccagggtcgcggtaaagcggacctgatgaaacaacgtggcgaaaac
cgctataccattctggataacggtagctttacctcctgtctgccgggttctgacacctgg
agcgtggtaggtagcgaaattattcatgaccgcgaagaacaagttgcggagatctggaac
gcccgctttaaggtgggtccggtatcgatcttttatagcccctatttgcagttgccggtg
ggtgacaaacgtcgctctggtttcttgatcccgaacgccaagtacaccaccaccaactac
tttgagttctacctgccatattactggaacatcgcgccaaatatggatgccaccatcacg
ccgcattatatgcatcgtcgtggcaacatcatgtgggagaacgaattccgctacctctcc
caggcgggcgctggcttgatggaactggactatctgccttcagataaagtctatgaagat
gaacacccgaacgatgacagttcacgtcgttggttattctactggaaccactccggggtc
atggatcaggtgtggcgtttcaacgtcgactacaccaaggtcagcgatcctagctacttc
aatgatttcgataacaagtacggttccagtactgacggctacgcaacgcaaaaattcagc
gttggctatgcggtgcaaaacttcaatgccaccgtttcaaccaagcagttccaggttttc
agcgaacagaacaccagtagctactcggcagagccgcagttagacgttaattactaccag
aatgatgttggtccgtttgatacgcgtatttacggccaggcagtgcactttgttaacacc
agagacgacatgcctgaagcaacccgtgttcacctggaaccgaccatcaatttgccgctc
tctaataactggggcagcatcaataccgaagcgaagttgctggcaacccattatcagcaa
accaatcttgactggtataactccagaaacacgaccaagctggacgaatccgttaaccgc
gtaatgccgcaattcaaagttgacggcaaaatggtctttgaacgcgatatggaaatgctg
gctccgggttatacccaaacgctggaaccgcgcgcgcagtatttgtacgtgccgtatcgc
gatcagagcgacatctataactacgactcgtctctgctgcaatctgactactctggcctg
ttccgggaccggacttacggcggtcttgaccgtattgcctccgctaaccaggtgacgacc
ggtgtcacatctcgcatatatgatgatgctgccgttgaacgttttaatatttccgttggt
caaatctactatttcacggagtctcgcactggcgatgacaacataacatgggagaatgac
gacaaaacgggttcactggtgtgggcaggcgatacttactggcgtatctccgagcgttgg
ggattgcgtggcgggattcagtacgatacacgtctggataacgtagcgaccagtaactcc
agcattgaataccgtcgggatgaagaccgtctggtacagctgaattaccgttacgccagc
ccggaatatattcaggctacgctgcctaagtactattccactgctgagcaatataagaat
ggtatttcgcaggtaggtgctgtcgccagctggccaattgccgatcgttggtccattgtt
ggggcctactactacgacaccaatgcgaacaagcaagccgactctatgttaggtgtgcaa
tacagctcctgctgctatgcaattcgcgtcggttacgagcggaagctgaacggttgggat
aacgataaacaacatgcggtatatgacaacgcaatcggctttaacatcgaacttcgcggc
ctgagctccaactacggtctgggtacgcaagagatgctgcgttcgaacattctgccgtat
caaaacactttgtga
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