Escherichia coli O157 H7 Sakai (EHEC): ECs_0962
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Entry
ECs_0962 CDS
T00048
Symbol
ybjD
Name
(RefSeq) OLD family ATP-dependent endonuclease
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
ECs_0962 (ybjD)
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GFIT
Motif
Pfam:
DUF2813
OLD-like_TOPRIM
AAA_15
AAA_21
AAA_29
ABC_tran
AAA_23
SMC_N
DUF3801
Motif
Other DBs
NCBI-GeneID:
917699
NCBI-ProteinID:
NP_308989
UniProt:
Q8X6K5
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Position
1047549..1049207
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AA seq
552 aa
AA seq
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MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF
WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE
DGSVMTLRSFLDKDGHPIDVEDINDQAHHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE
VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE
QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH
PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED
SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK
PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ
GFSDVFHRVAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF
SRVLWLARGRAD
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgattcttgagcgcgttgaaattgtgggttttcgcggtatcaaccgtttgtcgttgatg
ctggaacaaaacaacgtcctgattggggagaacgcgtggggtaaatccagcttgctggac
gccttaaccctgctgctatcgccagaatcagatctctaccattttgagcgcgacgatttc
tggttcccgccgggagatatcaacgggcgagaacatcatctgcatattattttgaccttc
cgcgaatcgctgccaggtcgacatcgggttcgccgttatcggccgctggaagcgtgctgg
acgccatgcaccgatggctatcaccgtattttttatcgtctggaaggggagagtgcggaa
gacggcagcgtgatgacactgcgcagttttctcgataaagacggacatccgattgatgtt
gaggatattaacgatcaggcacaccatctggtgcgtttaatgccggtgctgcgcttgcgt
gatgcccgttttatgcgccgtattcgtaacggcacggtgccaaatgtccccaatgtggaa
gtcaccgcgcgccagctcgatttcctcgcccgtgagttgtcctcacatccgcaaaatctc
tctgatggacagattcgtcagggactttccgcaatggtgcagttgcttgagcattatttc
tctgagcagggggctggacaggcgcgatatcgtttaatgcggcggcgggccagcaatgag
caacgaagctggcgctatctggacatcatcaaccggatgattgaccgacctggagggcgc
tcgtatcgggttattttgctcggcctgtttgctactttattgcaggcaaaaggcacattg
cgactggataaagacgcccgtccattgttgctgatcgaagatccagaaacgcgtttacac
cccattatgctttcagttgcctggcatctgttgaatcttttgcctttacaacgtattgct
accaccaactctggcgagctgctttcgttaactccagtggaacatgtttgccgcctggtg
cgtgaatcttctcgtgttgccgcctggcgtctggggccaagtggcttgagcaccgaagac
agccgccgcatctcttttcacattcgttttaatcgtccgtcatcgctgtttgctcgctgc
tggttgctggtggaaggggaaacggaaacctgggttatcaatgaactggcgcgtcagtgc
ggacatcattttgatgccgaagggatcaaggtcattgagtttgcccagtccgggctaaag
ccactggttaaatttgcccgccgaatggggattgaatggcatgtactggtcgatggcgat
gaagcagggaagaaatatgccgctacggtacgcagcctgttgaataatgatcgggaagcc
gaacgagaacatttaacggcgttaccggcgctggatatggaacattttatgtatcgccag
ggattttccgatgtgttccaccgcgtggcgcaaatcccggaaaatgtcccgatgaatctg
cgcaaaattatctcgaaagcgatccatcgctcttccaaacccgatcttgccattgaagtg
gcaatggaggccggacgtcgtggtgtggactccgtaccgacgctgctgaaaaaaatgttc
tcacgcgtgctgtggctggcgcgcggtcgcgcggattaa
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