Escherichia coli O157 H7 Sakai (EHEC): ECs_1012
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Entry
ECs_1012 CDS
T00048
Symbol
ompF
Name
(RefSeq) outer membrane porin OmpF
KO
K09476
outer membrane pore protein F
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Pathway
ecs01501
beta-Lactam resistance
ecs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECs_1012 (ompF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ECs_1012 (ompF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecs02000
]
ECs_1012 (ompF)
01504 Antimicrobial resistance genes [BR:
ecs01504
]
ECs_1012 (ompF)
Transporters [BR:
ecs02000
]
Other transporters
Pores ion channels [TC:
1
]
ECs_1012 (ompF)
Antimicrobial resistance genes [BR:
ecs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
ECs_1012 (ompF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Porin_1
Porin_4
Motif
Other DBs
NCBI-GeneID:
917757
NCBI-ProteinID:
NP_309039
UniProt:
Q8XDF1
LinkDB
All DBs
Position
complement(1115366..1116454)
Genome browser
AA seq
362 aa
AA seq
DB search
MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDM
TYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDY
GRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYL
GKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQLLGNGKKAEQWATGL
KYDANNIYLAANYGETRNATPITNKFTNISGFANKTQDVLLVAQYQFDFGLRPSIAYTKS
KAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVY
QF
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgcaatattctggcagtgatcgtccctgctctgttagtagcaggtactgca
aacgctgcagaaatctataacaaagatggcaacaaagtagatctgtacggtaaagctgtc
ggtctgcattatttctccaagggtaacggtgaaaacagttacggtggcaatggcgacatg
acctatgcccgtcttggttttaaaggggaaactcaaatcaattccgatctgaccggttat
ggtcagtgggaatataacttccagggtaacaactctgaaggcgctgacgctcaaactggt
aacaaaacgcgtctggcattcgcgggtcttaaatacgctgacgttggttctttcgattac
ggccgtaactacggtgtggtttatgatgcactgggttacaccgatatgctgccagaattt
ggtggtgatactgcatacagcgatgacttcttcgttggtcgtgttggcggcgttgctacc
tatcgtaactccaacttctttggtctggttgatggcctgaacttcgctgttcagtacctg
ggtaaaaacgagcgtgacactgcacgccgctctaacggcgacggtgttggcggttctatc
agctacgaatacgaaggctttggtatcgttggtgcttatggtgcagctgaccgtaccaac
ctgcaagaagctcaacttcttggcaacggtaaaaaagctgaacagtgggctactggtctg
aagtatgatgcgaacaacatctacctggcagcgaactacggtgaaacgcgtaacgctacg
ccgatcactaataaatttacaaacatcagcggcttcgccaacaaaacgcaagacgttctg
ttagttgcgcaataccagttcgatttcggtctgcgtccgtccatcgcttacaccaaatct
aaagcgaaagacgtagaaggtatcggtgatgttgatctggtgaactactttgaagtgggc
gcaacctactacttcaacaaaaacatgtccacctatgttgactacatcatcaaccagatc
gattctgacaacaaactgggcgtaggttcagacgacaccgttgctgtgggtatcgtttac
cagttctaa
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