Escherichia coli O157 H7 Sakai (EHEC): ECs_1139
Help
Entry
ECs_1139 CDS
T00048
Symbol
gfcE
Name
(RefSeq) O-antigen capsule outer membrane auxiliary protein export channel
KO
K01991
polysaccharide biosynthesis/export protein
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Pathway
ecs02020
Two-component system
ecs02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECs_1139 (gfcE)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECs_1139 (gfcE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecs02000
]
ECs_1139 (gfcE)
Transporters [BR:
ecs02000
]
Other transporters
Pores ion channels [TC:
1
]
ECs_1139 (gfcE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
SLBB
Wza_C
JmjC_2
Motif
Other DBs
NCBI-GeneID:
915179
NCBI-ProteinID:
NP_309166
UniProt:
P0A933
LinkDB
All DBs
Position
complement(1223937..1225076)
Genome browser
AA seq
379 aa
AA seq
DB search
MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQYDLDKMVNIYPVTPGLI
DQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWV
NADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQVDVSVAAFRSQKAYVTGEVS
KSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKL
LHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFV
IRATQNKQNGKIANIYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPT
ISGVHDLTETSRWIQTWPN
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagca
tgtacccttgttcctggtcagaatttatcgaccagtaacaaggatgtcattgaactacct
gacaatcagtatgacctggacaaaatggtcaatatctatcccgtcacgccaggattgatt
gatcagttgcgcgccaaaccgattatgtcgcaggctaacccggagctggagcagcaaatc
gcgaactatgaatatcgtatcggcattggtgatgtgttgatggttacggtctgggatcac
ccggaactaaccacccccgcagggcaataccgtagcgccagtgataccggcaactgggtt
aacgccgatggtgcgattttctacccctatattggtcgcctgaaagtggccgggaaaaca
cttacccaggtacgcaacgagattacagcgcgtctggattcagtcattgaaagcccgcaa
gtcgatgtcagcgtcgcggcgttccgctcgcaaaaagcgtacgtcaccggtgaagtcagc
aaatcgggtcagcagccgattaccaatattcctctgaccatcatggatgcgattaacgcc
gcgggcggtctgaccgcagatgcagactggcgcaatgtggtgctcacccagaatggcgta
aagaccaaagtgaacctctatgcgctgatgcagcgtggcgacttgcgccagaacaaactg
ctgcacccgggagatattttatttattccgcgcaacgatgatctgaaagtcttcgtgatg
ggtgaagtgggtaaacagagcacgctgaaaatggaccgcagcggtatgaccctggcggaa
gcgctgggtaacgctgagggtatgaatcaggatgtcgctgatgcgacggggatttttgtt
attcgtgcaacgcaaaacaagcagaatggcaaaatcgccaatatttatcagctgaatgcg
aaggacgcatcggcaatgatactcggaacggaattccagcttgaaccttacgacattgtt
tatgtcactaccgcgcctctggctcgttggaaccgtgtgatttccctgctggtaccgacg
atttccggggtgcatgacctgacagagacttcacggtggattcaaacatggcccaactaa
DBGET
integrated database retrieval system
