Escherichia coli O157 H7 Sakai (EHEC): ECs_2513
Help
Entry
ECs_2513 CDS
T00048
Symbol
rnd
Name
(RefSeq) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecs03016
]
ECs_2513 (rnd)
Enzymes [BR:
ecs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ECs_2513 (rnd)
Transfer RNA biogenesis [BR:
ecs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ECs_2513 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-GeneID:
913837
NCBI-ProteinID:
NP_310540
UniProt:
A0A0H3JFG5
LinkDB
All DBs
Position
complement(2488830..2489945)
Genome browser
AA seq
371 aa
AA seq
DB search
MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWS
PLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEE
YSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECR
LMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHL
WSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEEALPQPMLNLMDMPGYR
KAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAE
ALHNLLQEYPQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgattaccacggacgatgcgctggcttctttgtgtgaagccgtccgtgcctttccggcg
atagccctggatactgaatttgttcgtacgcgcacttattacccgcagctggggttgatt
caacttttcgatggcgagcatctggcgctaattgatcctctcgggatcaccgactggtca
ccgctgaaagcgatcctgcgcgatccgtccatcacaaaatttctccatgcaggcagtgaa
gatctggaagtgttcctcaatgtctttggcgaattaccacaacccctgattgacacgcaa
atccttgctgccttctgcggacgcccgatgtcatggggtttcgcttccatggtggaagag
tattccggcgttacgctggacaagagtgaatcgcgcaccgactggctggccagaccgctg
accgaacgtcagtgtgaatatgcagcggcggatgtctggtatctgttaccgatcaccgcc
aagcttatggtagaaacggaggcctccggctggctaccagcggcgctggatgaatgtcgc
ctgatgcaaatgcgtcgtcaggaagtcgttgcgccggaagatgcctggcgtgatatcacc
aatgcctggcaattacgcacacgccaactggcctgtctgcaactgttagccgactggcga
ctgcgcaaggcgcgagagcgcgatctggcggtgaactttgtcgtgcgtgaagagcatttg
tggtcggtagcgcgttatatgccgggaagtttaggcgaactggacagcctgggtttatcc
ggtagcgaaatccgctttcacggtaaaacgctgctggcgctggtggaaaaagcgcagaca
ttgccggaagaggccttaccgcagccgatgcttaacctgatggacatgccgggttatcgt
aaagcgtttaaagcgattaagtcgctgattactgacgtgagcgaaacgcacaagatcagc
gccgaattgctggcatcgcgtcggcaaatcaaccaactgctgaactggcactggaaactg
aaaccgcagaacaatttgccggagctgatttccggctggcgtggtgagctgatggcggaa
gcattacacaatttattgcaggaatatccgcagtaa
DBGET
integrated database retrieval system
