KEGG   Escherichia coli O157 H7 Sakai (EHEC): ECs_3433
Entry
ECs_3433          CDS       T00048                                 
Symbol
rnc
Name
(RefSeq) RNase III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ecs  Escherichia coli O157:H7 Sakai (EHEC)
Pathway
ecs03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ecs00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    ECs_3433 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecs03019]
    ECs_3433 (rnc)
   03009 Ribosome biogenesis [BR:ecs03009]
    ECs_3433 (rnc)
   03036 Chromosome and associated proteins [BR:ecs03036]
    ECs_3433 (rnc)
Enzymes [BR:ecs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     ECs_3433 (rnc)
Messenger RNA biogenesis [BR:ecs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ECs_3433 (rnc)
Ribosome biogenesis [BR:ecs03009]
 Eukaryotic type
  90S particles
   RNase
    ECs_3433 (rnc)
 Prokaryotic type
  rRNA processing factors
   ECs_3433 (rnc)
Chromosome and associated proteins [BR:ecs03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     ECs_3433 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-GeneID: 914894
NCBI-ProteinID: NP_311460
UniProt: P0A7Y2
LinkDB
Position
complement(3423902..3424582)
AA seq 226 aa
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gaactgttgcagcaggcattaactcatcgtagtgccagcagcaaacataacgagcgttta
gaatttttaggcgactctattctgagctacgttatcgccaatgcgctttatcaccgtttc
cctcgtgtggatgaaggcgatatgagccggatgcgcgccacgctggtccgtggcaatacg
ctggcggaactggcgcgcgaatttgagttaggcgagtgcttacgtttaggaccaggtgaa
cttaaaagcggtggatttcgtcgtgagtcaattctcgccgacaccgtcgaagcattaatt
ggtggcgtattcctcgacagtgatattcaaaccgtcgagaaattaatcctcaactggtat
caaactcgtctggacgaaattagcccaggcgataaacaaaaagatccgaaaacgcgcttg
caagaatatttgcagggtcgtcatctgccgctgccgacttatctggtagttcaggtccgt
ggcgaagcgcacgatcaggaatttacaatccactgccaggtcagcggcctgagtgaaccg
gtggttggcacaggttcaagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga

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