Escherichia coli O157 H7 Sakai (EHEC): ECs_3608
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Entry
ECs_3608 CDS
T00048
Symbol
ygbF
Name
(RefSeq) CRISPR adaptation ssRNA endonuclease
KO
K09951
CRISPR-associated protein Cas2
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ecs02048
]
ECs_3608 (ygbF)
Prokaryotic defense system [BR:
ecs02048
]
CRISPR-Cas system
Universal Cas proteins
ECs_3608 (ygbF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas2CT1978
Motif
Other DBs
NCBI-GeneID:
914670
NCBI-ProteinID:
NP_311635
UniProt:
A0A0H3JHB3
LinkDB
All DBs
Position
complement(3598658..3598951)
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AA seq
97 aa
AA seq
DB search
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAW
ATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggtcgtggttgttacagaaaatgtccctccgcgcttacgtggacggctcgca
atctggctactggaagtgcgtgccggtgtgtatgttggtgatacatcaaaacgtattcgg
gagatgatctggcagcaaattacccaactggctggttgcggaaatgtggtgatggcctgg
gcgaccaataccgagtcgggttttgaatttcagacctggggagaaaacagacgtattccg
gtggatttggatgggttacgtttggtttcttttcttcctgttgataatcaatag
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