Escherichia coli O157 H7 Sakai (EHEC): ECs_4045
Help
Entry
ECs_4045 CDS
T00048
Symbol
pnp
Name
(RefSeq) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Pathway
ecs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECs_4045 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecs03019
]
ECs_4045 (pnp)
03016 Transfer RNA biogenesis [BR:
ecs03016
]
ECs_4045 (pnp)
Enzymes [BR:
ecs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ECs_4045 (pnp)
Messenger RNA biogenesis [BR:
ecs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECs_4045 (pnp)
Transfer RNA biogenesis [BR:
ecs03016
]
Prokaryotic type
tRNA degradation factors
ECs_4045 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-GeneID:
916115
NCBI-ProteinID:
NP_312072
UniProt:
Q8X9M3
LinkDB
All DBs
Position
complement(4051658..4053793)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNE
ALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggccaacacaccgtgactctggaaacc
ggcatgatggctcgtcaggctactgccgctgttatggttagcatggatgacaccgcggta
tttgttaccgttgttggccagaaaaaagccaaaccaggtcaggacttcttcccactgacc
gttaactatcaggagcgtacctacgctgctggtcgtatcccgggtagcttcttccgtcgt
gaaggtcgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccgattcgc
ccgctgttcccggaaggcttcgtcaacgaagttcaggttatcgccaccgtggtttctgtt
aacccgcaggttaacccggatatcgtcgcgatgattggtgcttccgcagcactgtctctg
tctggtattccgttcaatggcccgattggtgctgcccgcgtaggttacatcaatgaccag
tacgtactgaacccgactcaggacgagctgaaagagagcaaactggatctggttgttgcg
ggtactgaagccgctgtactgatggttgaatctgaagctgaactgctgagcgaagaccag
atgctgggcgcagtagtgttcggtcatgaacaacagcaggttgttattcagaacatcaat
gaactggtgaaagaagccggtaaaccgcgttgggactggcagccggagccggtaaacgaa
gcgctgaacgcgcgcgttgctgcactggctgaagctcgtctgagcgatgcttaccgcatc
accgacaaacaagagcgttatgcgcaggttgatgtcatcaaatctgaaaccatcgcgacg
ctgcttgctgaagacgaaaccctggacgaaaacgaactgggtgaaattctgcacgcgatc
gagaaaaacgttgttcgtagccgcgtactggcaggcgaaccgcgtatcgatggtcgtgaa
aaagatatgatccgtggtctggatgtgcgtactggcgtgctgccgcgtactcacggttct
gcgctgttcacccgtggtgaaacgcaggcgctggttaccgcaacgctgggtactgctcgt
gacgcgcaggttcttgatgaactgatgggcgaacgtaccgataccttcctgttccactac
aacttccctccgtactccgtaggcgaaaccggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtaatgccggatatggacaaa
ttcccgtacaccgtacgtgttgtgtctgaaatcactgaatccaacggttcttcttctatg
gcttccgtgtgcggtgcgtctctggcgctgatggacgcaggtgtgccaatcaaagctgcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaactacgttgtactgtctgac
attttgggcgacgaagatcacctgggcgatatggacttcaaagttgcgggttcccgcgac
ggtatctctgcactgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcactgaaccaggctaaaggtgcgcgtctgcacatcctgggtgtaatggaacaggcg
atcaacgcgccacgtggcgatatctctgagttcgctccgcgtatccataccatcaagatc
aacccggacaagatcaaagacgttatcggtaaaggcggctctgtgatccgtgccctgacc
gaagaaactggcaccaccatcgaaatcgaagatgacggtactgtgaagatcgcagcgacc
gatggcgagaaagcgaaacacgctattcgtcgtatcgaagagatcactgcagaaattgaa
gtgggccgcgtctacactggtaaagtgacccgtatcgttgacttcggcgcatttgttgcc
atcggcggcggtaaagaaggtctggtccacatctctcaaatcgctgacaaacgcgttgag
aaagtgaccgattacctgcagatgggtcaggaagtaccggtgaaagttctggaagttgat
cgccagggccgtatccgtctgagcattaaagaagcgactgagcagtctcaacctgctgca
gcaccggaagctccggctgctgaacagggcgagtaa
DBGET
integrated database retrieval system