KEGG   Escherichia coli O157 H7 Sakai (EHEC): ECs_4045
Entry
ECs_4045          CDS       T00048                                 
Symbol
pnp
Name
(RefSeq) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
ecs  Escherichia coli O157:H7 Sakai (EHEC)
Pathway
ecs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ecs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ECs_4045 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecs03019]
    ECs_4045 (pnp)
   03016 Transfer RNA biogenesis [BR:ecs03016]
    ECs_4045 (pnp)
Enzymes [BR:ecs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     ECs_4045 (pnp)
Messenger RNA biogenesis [BR:ecs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ECs_4045 (pnp)
Transfer RNA biogenesis [BR:ecs03016]
 Prokaryotic type
  tRNA degradation factors
   ECs_4045 (pnp)
SSDB
Motif
Pfam: RNase_PH PNPase S1 RNase_PH_C KH_1 S1_2 KH_2 OB_RRP5_4th S1_RRP5 aRib KH-I_KHDC4-BBP KH_SLS1_2
Other DBs
NCBI-GeneID: 916115
NCBI-ProteinID: NP_312072
UniProt: Q8X9M3
LinkDB
Position
complement(4051658..4053793)
AA seq 711 aa
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNE
ALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE
NT seq 2136 nt   +upstreamnt  +downstreamnt
ttgcttaatccgatcgttcgtaaattccagtacggccaacacaccgtgactctggaaacc
ggcatgatggctcgtcaggctactgccgctgttatggttagcatggatgacaccgcggta
tttgttaccgttgttggccagaaaaaagccaaaccaggtcaggacttcttcccactgacc
gttaactatcaggagcgtacctacgctgctggtcgtatcccgggtagcttcttccgtcgt
gaaggtcgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccgattcgc
ccgctgttcccggaaggcttcgtcaacgaagttcaggttatcgccaccgtggtttctgtt
aacccgcaggttaacccggatatcgtcgcgatgattggtgcttccgcagcactgtctctg
tctggtattccgttcaatggcccgattggtgctgcccgcgtaggttacatcaatgaccag
tacgtactgaacccgactcaggacgagctgaaagagagcaaactggatctggttgttgcg
ggtactgaagccgctgtactgatggttgaatctgaagctgaactgctgagcgaagaccag
atgctgggcgcagtagtgttcggtcatgaacaacagcaggttgttattcagaacatcaat
gaactggtgaaagaagccggtaaaccgcgttgggactggcagccggagccggtaaacgaa
gcgctgaacgcgcgcgttgctgcactggctgaagctcgtctgagcgatgcttaccgcatc
accgacaaacaagagcgttatgcgcaggttgatgtcatcaaatctgaaaccatcgcgacg
ctgcttgctgaagacgaaaccctggacgaaaacgaactgggtgaaattctgcacgcgatc
gagaaaaacgttgttcgtagccgcgtactggcaggcgaaccgcgtatcgatggtcgtgaa
aaagatatgatccgtggtctggatgtgcgtactggcgtgctgccgcgtactcacggttct
gcgctgttcacccgtggtgaaacgcaggcgctggttaccgcaacgctgggtactgctcgt
gacgcgcaggttcttgatgaactgatgggcgaacgtaccgataccttcctgttccactac
aacttccctccgtactccgtaggcgaaaccggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtaatgccggatatggacaaa
ttcccgtacaccgtacgtgttgtgtctgaaatcactgaatccaacggttcttcttctatg
gcttccgtgtgcggtgcgtctctggcgctgatggacgcaggtgtgccaatcaaagctgcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaactacgttgtactgtctgac
attttgggcgacgaagatcacctgggcgatatggacttcaaagttgcgggttcccgcgac
ggtatctctgcactgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcactgaaccaggctaaaggtgcgcgtctgcacatcctgggtgtaatggaacaggcg
atcaacgcgccacgtggcgatatctctgagttcgctccgcgtatccataccatcaagatc
aacccggacaagatcaaagacgttatcggtaaaggcggctctgtgatccgtgccctgacc
gaagaaactggcaccaccatcgaaatcgaagatgacggtactgtgaagatcgcagcgacc
gatggcgagaaagcgaaacacgctattcgtcgtatcgaagagatcactgcagaaattgaa
gtgggccgcgtctacactggtaaagtgacccgtatcgttgacttcggcgcatttgttgcc
atcggcggcggtaaagaaggtctggtccacatctctcaaatcgctgacaaacgcgttgag
aaagtgaccgattacctgcagatgggtcaggaagtaccggtgaaagttctggaagttgat
cgccagggccgtatccgtctgagcattaaagaagcgactgagcagtctcaacctgctgca
gcaccggaagctccggctgctgaacagggcgagtaa

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