Escherichia coli O157 H7 Sakai (EHEC): ECs_4047
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Entry
ECs_4047 CDS
T00048
Symbol
truB
Name
(RefSeq) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecs03016
]
ECs_4047 (truB)
Enzymes [BR:
ecs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ECs_4047 (truB)
Transfer RNA biogenesis [BR:
ecs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECs_4047 (truB)
Prokaryotic type
ECs_4047 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
916110
NCBI-ProteinID:
NP_312074
UniProt:
P60342
LinkDB
All DBs
Position
complement(4054458..4055402)
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AA seq
314 aa
AA seq
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MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattaacggcgttttgttgctggataaaccg
cagggtatgtccagcaacgatgcgctgcaaaaagtgaaacgtatatataacgccaatcgt
gccgggcataccggtgcgctggacccgctggcgaccggcatgttgccgatttgcctcggg
gaagcgacgaagttttcccagtatctgctggactccgacaaacgctatcgggtcattgcg
cgtcttggacagcgtaccgatacttctgacgccgacggacaaatcgttgaagagcgtccg
gtaacctttagtgcagaacaactggcggcggcactggatactttccgtggcgatatcgaa
cagatcccatcgatgtattcagcactgaaataccagggcaaaaaactgtacgaatatgcg
cgtcagggcattgaagttccgcgtgaagcgcgtccaattaccgtttatgaattgctgttt
attcgccatgaaggcaatgagctggagctggaaattcactgctcaaaaggcacttatatc
cgcaccatcattgatgacctgggtgaaaaactcggctgtggcgcgcatgtgatttacctg
cgtcgtctggcggtaagtaaatatccggttgaacggatggtgaccctggagcacctgcgt
gaactggtcgaacaagccgaacagcaggatattccggctgcggagttgcttgatccatta
ctgatgccaatggacagtccagcttcggactacccggtggtgaatcttccgttaacgtct
tctgtttacttcaaaaatggtaacccggttcgtacatctggcgcgccgctggaaggactg
gttcgcgttacggaaggtgagaacggcaagtttatcggtatgggcgaaattgacgatgaa
ggccgcgttgcgcctcgtcgtctggtggttgaatacccggcgtaa
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