Escherichia coli O157 H7 Sakai (EHEC): ECs_4739
Help
Entry
ECs_4739 CDS
T00048
Symbol
dapF
Name
(RefSeq) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Pathway
ecs00300
Lysine biosynthesis
ecs00470
D-Amino acid metabolism
ecs01100
Metabolic pathways
ecs01110
Biosynthesis of secondary metabolites
ecs01120
Microbial metabolism in diverse environments
ecs01230
Biosynthesis of amino acids
Module
ecs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ECs_4739 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ECs_4739 (dapF)
Enzymes [BR:
ecs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ECs_4739 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-GeneID:
915186
NCBI-ProteinID:
NP_312766
UniProt:
P0A6K2
LinkDB
All DBs
Position
4788547..4789371
Genome browser
AA seq
274 aa
AA seq
DB search
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcaccggagctgattcgtcgcctagctgatcggcacctgggggta
gggtttgaccaactgctggtggttgagccgccgtatgatcctgaactggattttcactat
cgcattttcaatgctgatggcagtgaagtggcgcagtgcggcaacggcgcacgctgcttt
gcccgttttgtgcgtctgaaagggctgaccaataagcgcgatatccgcgtcagcaccgcc
aacgggcggatggttcttaccgtcaccgatgatgatctggtccgcgtaaatatgggcgaa
cccaacttcgaaccttctgccgtgccgtttcgcgctaacaaagcggaaaagacctatatt
atgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccacattgc
gtgattcaggtcgatgatgtcgatactgcggcggtagaaacactggggcctgttctggaa
agccacgagcgttttccggagcgcgccaatatcggttttatgcaagtggttaagcgcgag
catattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagcggc
gcatgtgcggcggttgcagtagggattcagcaaggtttgctggccgaagaagtacgcgtg
gaactcccaggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatatatg
actggcccggcggtacatgtctacgacggatttattcatctatga
DBGET
integrated database retrieval system