Escherichia coli O157 H7 Sakai (EHEC): ECs_4862
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Entry
ECs_4862 CDS
T00048
Symbol
priA
Name
(RefSeq) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Pathway
ecs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECs_4862 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecs03400
]
ECs_4862 (priA)
Enzymes [BR:
ecs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECs_4862 (priA)
DNA repair and recombination proteins [BR:
ecs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECs_4862 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
915025
NCBI-ProteinID:
NP_312889
UniProt:
Q8X779
LinkDB
All DBs
Position
complement(4926231..4928429)
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AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPEGMAVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNEL
KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA
TEQGHAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET
PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG
STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI
LSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgcccacgttgccttgcccgttccgcttcctcgtacctttgactatctcctg
ccagaaggcatggcggttaaagccgggtgtcgcgtgcgcgtgccgtttggcaaacagcag
gagcgcatcggggttgtggtgtcagttagcgacgtcagtgagctgccgcttaacgagcta
aaagcggtagtcgaagtgctggatagtgagccggtgtttactcactccgtctggcgattg
ctgctctgggcggcggattactatcatcatccgattggcgatgtgctgtttcatgccttg
ccgattttactgcgccaggggcggcctgcggcgaacgcgccgatgtggtactggtttgcc
actgaacaaggccatgcggtggatctgaacagcctgaaacgttcgccaaagcaacaacag
gcactggcggcattgcggcaaggcaaaatctggcgcgaccaggttgccacgcttgaattt
aatgatgccgcgttacaggcgctgcgcaaaaaaggtctgtgtgatttagcaagtgaaaca
ccagagtttagcgactggcgaacgaactatgccgtttctggtgaacggttgcgattgaat
accgaacaggccaccgccgttggcgcaattcatagcgcggcggataccttctctgcttgg
ctgctggcgggcgttacaggttccggtaaaacagaggtttatttgagcgtactggaaaac
gtgctcgctcagggcaaacaggcgctggtgatggtgccggaaatcggcctgacaccgcaa
actatcgcccgttttcgtgaacgttttaatgcccccgtagaagttctgcattccggcctg
aacgacagcgagcgtctttcggcgtggttgaaagcgaaaaatggtgaggcggcgattgtc
atcggcacccgctccgcgctgtttacgccgtttaaaaatctcggtgtgattgtcattgat
gaagagcacgacagttcctacaagcagcaggaaggctggcgctatcatgcccgcgacctg
gcggtttatcgtgcgcacagcgagcaaatcccgattattcttggctccgcaacacccgca
ctggaaacgttatgcaacgtccagcagaaaaaataccgcctgctgcgcctgacgcgtcgg
gcggggaatgcgcgtccggcaattcaacatgtgctggatttaaaaggtcagaaggtgcag
gcggggctggctccggcgttaatcacccgtatgcgccagcatttacaggccgacaaccag
gttatcctctttcttaaccgccgtggctttgcgcctgccttgctgtgccacgactgcggc
tggattgccgaatgtccacgttgcgatcactactacacgctgcatcaggcgcaacagcat
ttgcgctgtcaccactgtgacagccaacgcccggtgccgcgccagtgcccttcctgcggt
tccacgcacctggtacccgtggggctgggcaccgaacagcttgaacagacgctcgcgccg
ttattccctggtgtgcccatttctcgtatcgaccgcgataccaccagccgcaaaggagcg
ctggaacaacaactggcggaagtgcatcgcggcggcgcgaggatattgattggcacgcaa
atgctggcgaaaggtcaccactttccggatgtgacgctggtagcgttactggatgtggac
ggcgcgctgttttctgccgattttcgctcggcagagcgttttgcccagctatacacccag
gtagcaggccgtgccgggcgtgcgggtaaacagggcgaagtggtgctgcaaacgcatcat
ccggaacacccgctattgcaaacgttgctctataaaggctacgacgcttttgccgaacag
gcactggctgagcggcgaatgatgcaactgccgccgtggaccagccatgtgattgtgcgt
gcggaagatcataacaatcagcacgcgccattgttcctgcaacaactgcgtaatctgatc
ctctccagcccgctggcagacgacaaattgtgggttctcggtccggttccggcactggca
cctaaacgtggcggtcgctggcgctggcagatattgttgcagcacccttcccgcgtgcgc
ttgcaacacatcattaacggtacgctggcactcatcaatacaataccggattcccgtaag
gtgaaatgggtgctggatgttgatccgattgagggttaa
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