Escherichia coli O157 H7 Sakai (EHEC): ECs_5141
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Entry
ECs_5141 CDS
T00048
Symbol
orn
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Pathway
ecs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ECs_5141 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecs03019
]
ECs_5141 (orn)
03009 Ribosome biogenesis [BR:
ecs03009
]
ECs_5141 (orn)
Messenger RNA biogenesis [BR:
ecs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ECs_5141 (orn)
Ribosome biogenesis [BR:
ecs03009
]
Eukaryotic type
Pre-60S particles
RNases
ECs_5141 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
915776
NCBI-ProteinID:
NP_313168
UniProt:
Q8XDP0
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All DBs
Position
5245456..5246001
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AA seq
181 aa
AA seq
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MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDG
WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggtctggatccc
gagcgcgatcgcattattgagattgccacgctggtgaccgatgccaatctgaatattctg
gcagaagggccgaccattgcagtacatcagtccgatgaacagctggcgctgatggatggc
tggaacgtgcgcacccataccgccagcgggctggtggagcgcgtgaaagcgagcacgatg
ggcgatcgtgaagctgaactggcaacgctcgaatttttaaaacagtgggtgcctgcgggt
aaatcgccgatttgcggtaacagcatcggtcaggatcgtcgcttcctgtttaaatacatg
ccggagctggaagcctacttccactaccgttatctcgatgtcagcaccctgaaagagctg
gcgcgccgctggaagccggaaattcttgatggttttaccaaacaggggacgcatcaggcg
atggatgatatccgtgaatcggtggcggagctggcttactaccgcgagcattttatcaag
ctgtaa
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