Escherichia coli O157 H7 Sakai (EHEC): ECs_5260
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Entry
ECs_5260 CDS
T00048
Name
(RefSeq) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
ECs_5260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
DUF7129
DUF167
Motif
Other DBs
NCBI-GeneID:
913735
NCBI-ProteinID:
NP_313287
UniProt:
Q8XC75
LinkDB
All DBs
Position
5367370..5373684
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AA seq
2104 aa
AA seq
DB search
MDVQQLHYAPLLNQLHQRAVRSVVSQLALRSKSLTHYLESQYFQPPGQEGSLLADPVFES
TFGWMPADETMEDLRDKLISSPLVDALSKAPVPFRHQLTAWRTILEDKKSLLVSSGTGSG
KTECFMVPVLEDLIRQQKSTRQSLTGTQAIFLYPLNALINSQQERLREWTRGFKGKIRFA
LYNGETRHTKYEIQEDQLKVPEQALSREAIYEAPPSIMVTNTTMLEYMLIRRKDAPIIEK
SQGMLKYIVLDEAHSYIGSQAAELALLLRRVMQAFNVGPGTDKPVQIIATSATIGEDSPE
GNKELAKFVADLAGVTERDVKVVRGYRQIPRVSESLIRHEYPTSLTSLKSLSPQDLYQQL
CHYRVAQQLRQALTHPGRQAVRLSELLNVARRTWPDINHRELLQLLDLMARSREGELAFT
PLRMHGFIRTLAGLWACSNKQCSHKAHELNQSDWPFGQVWFEQRQYCDCGAPVFEVLRCS
GCGSAYLSAKEEMRGDGTNWLVAQPAAAEVDEFALDVDVYSEDEDNDELDNNSQFDRLIA
SDGEKYIISLEETTAGKIDSEAQKHYEINLLRPESRGEGRNNSFACVCCGDTQRKNNPLF
RPLRLGAPFFLNEIIPTLLEFSPLPQTREEQLGPFNGRRLLTFTDSRQGTARISARLQQD
ADKATLRALCYQELANITEPSAKLSPAHCALLEKVISQFSVLPLKNSIDALKKAMAANEE
LSPTDIQALKIIEPMVSSLSTEHAEAMQILQANSGNQQKKTMSWQTLSEQLVGSVDLADR
MRGSFKELSGLDLTKQQFADFCLYSEFGRRPKNAWTLESLGLVAIHYPFIDKVTTCPQDW
KTLLPDPDKQLAEWRNLLKITLDFFIRENSAVFYENEQYPRWMGARFPVKMLQGPDKKNK
GQKRDQLWPQIRDRHYNRVIKLLIAVFPAIQPEQAHWKSLVNHLMIEVWDAIRPCLRQFE
SGYQLDIKQQAEFYSPKQVWRCPYTRRALDVTLLGYSPYLPGSKEIAPEKAVLIEMPELP
VRHWRLSGGGEIAREERLEWLESNALIQHAREEGLWSTRSDRLALKDSWYRLEEHSAQRT
PEQNQFNEKQFKSGKVNVLNCSTTMEMGVDIGGMSLVAMNNVPPAPANYLQRAGRAGRRG
ESASAAITLCKNTAHGMEVFKDPLWAFNTTASAPRVRFGSSSIVQRHVNALVLGLFLRAE
VPDATKLSCKWFFEGDESQCLRFLHWLNHQADQLADKLKRLTQGTVLMSLTATQLLTRTQ
AMMQQVDIRWRSQLAILLENIEALKADNSAWEETPAGKAIAYQLRDYRGAYLFSKLISEA
FLPGHGFPVGVVNFNYLTADELEKRRAIKATQADPNEGGESFSRRIEKLPSRDLPTALRE
YAPGADVVLGGKVYRSSGIMLGKVLASGQELSGDHHIPWFWHCRKCGAGATSTTHPVECS
HCKADIQQLDVKRYLQPVGFATDIRYQAHNDVSMPAQLPWKDPRVLVPSSVWVSLPDAGL
GRYRFSHSGELFHFSEGEFGHGYAICLSCGRAESQTQPQRTPENLKNPERENTHYLLRGG
SNDRQGSNKLCHGHVHKDLWLGYSSRTDMVELQLNDDNGLLIRDEVAARSLAVALREGLA
HKLGIENTELGVTTQQARDINGYTGYSIFIYDNNAGGAGYAVQLIDHWADVFNYARKLLD
CSCDKFCHHCLLSYDSQHYVNRLDRHHALTLLTNVRLQRLNLAPEYQYFGDGSRVETNPL
SLRIAQCLNSEIYDSCSLVLAGPQEQWDFAQWPLFKELLQFASSGGNVELLVATPLANLT
DSSRHQLSALAAMPGGRLQVKSIATAQLMQGKGRWLAQVTREGQSQQWAADDSATVAPGE
LWGQSASSPVVTLKGTSGKTFSGQTLSAEDLLPALPTGAVRINLCEQLDGPLEGFGSRFW
SLVTQQHAGWKQAFTRHKEITHVEYSDRYLNSPFTARLLGEILTELVEQGMAERASLTVC
VKKLDYNSRQHDALYNAWLNEEDRQQVVTTLLEEGYLGPAWPGAISWLTGDNQSTEHGRE
LTVTFSDGSQHYVLLDMGLSYWRCIEDTFFDFALRVPQQVERLANTRARAVAPGNDLRSY
IIAG
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atggacgttcagcaactgcattatgcgccacttctaaatcagcttcatcagcgtgcggtg
aggtcggtggtaagtcagttggcattgcggagcaagtcgttgactcattatctggaatca
caatattttcagcctcccggtcaggaggggtcactgcttgcagacccggtattcgaaagt
acattcggctggatgcctgcggatgaaacaatggaggatttgcgggacaagctgatctcc
agcccgctggttgatgcattgagcaaagcgccagtgccatttcgtcatcaacttactgcg
tggcgaacgattctggaagacaaaaaatccttgttagtgagcagcggtacgggatccggg
aaaacagaatgctttatggtaccggttctggaagatcttattcgtcagcaaaaatcgacc
cgccagtcactaacagggacacaagctattttcttgtatccgttaaatgcattaattaac
agccaacaggagcggcttcgcgaatggacgcgcggatttaaggggaaaatacgcttcgcg
ctatataatggcgaaacccggcataccaaatacgaaattcaggaagatcagttgaaagta
cctgaacaagctttgagtcgggaagccatttatgaagcaccaccttccatcatggtgacg
aataccaccatgctggaatatatgctgattcgtcgtaaagatgccccaatcatcgaaaag
tctcaggggatgttaaagtatatcgtcctggatgaagcccatagttatattggttctcag
gctgctgagttagcgctgcttttacgtcgtgttatgcaggctttcaatgttggacccggc
acagataaacctgtgcagattatcgcgacctctgccactattggtgaagactctcctgaa
ggtaataaggagcttgctaaatttgtcgctgatctcgcgggcgttacagaacgtgatgtc
aaagtggttcgcggttatcgacaaataccgcgggtatcggagtcgctgattcgtcatgaa
taccccacatctttaacttctcttaaatccctgagccctcaggatctttaccaacagctt
tgtcattaccgtgtggcccagcaattgcgtcaggcgttaactcatcccggacggcaggca
gtacgtttgagtgagttgctcaatgttgccagaagaacctggccagatattaatcaccgt
gagctactgcaactcctcgatctaatggcaagatcgcgagaaggtgaactggcttttacg
ccattacgtatgcatgggtttatcagaacactggcgggtctatgggcatgttcaaacaaa
caatgctcacataaagcacatgaattaaatcagagtgactggccatttggtcaggtatgg
tttgagcagcgccaatattgtgactgtggagcgccggtatttgaagttttacgttgctcc
gggtgtggttcagcttatttgtctgccaaagaggagatgcgcggtgatggaacgaactgg
ttggtagcgcaaccagccgctgccgaagtggatgagtttgctcttgatgtagatgtttat
tctgaagatgaagacaacgacgaattagacaataactctcaatttgatcgtctgattgcg
agcgatggtgaaaaatatatcatttcactggaagaaacgacggcggggaaaattgatagt
gaagcgcaaaagcactatgaaataaacctgttaagaccggaatctcgaggtgagggacgc
aataactcctttgcttgtgtttgctgtggtgacactcaacggaaaaataatcctttattc
cgtccgcttcggctcggcgcgcccttttttttaaatgaaattattcctactctgctggag
ttttctccattaccgcaaacaagagaagagcagttaggaccgtttaatggtcgacgcttg
ctcacctttacggattcgcgtcagggtaccgctcgcatttcagcccgcttacagcaggat
gccgataaagcgacgttgcgagctctttgttaccaggagctggcaaatattacagagcct
tcagcaaaactcagcccggcacactgtgcactgttagagaaagttattagccagttttct
gtcctccctttaaaaaattccatcgacgcgctgaaaaaagcgatggctgcgaatgaggag
cttagcccgacggacattcaggcacttaaaattattgagccgatggtgagttccttaagc
acggagcatgctgaagcgatgcaaatacttcaggctaactctggcaatcagcagaagaaa
accatgtcatggcaaacgctgtctgaacagctggttggcagtgtggaccttgccgataga
atgagaggcagttttaaagaattgtctgggcttgatcttactaaacaacagtttgcagat
ttttgtttatacagcgagtttggtcgccgccctaaaaatgcctggaccctcgaaagtctg
ggtctggtagccattcactatccattcattgataaagttacaacctgcccgcaggactgg
aagacattattacccgatcccgataagcaattagcggaatggcgtaatttattgaagatt
actcttgatttctttatccgtgaaaacagtgccgttttttacgaaaacgagcaataccct
cgctggatgggggcacgtttcccggtaaaaatgctccaggggccagataaaaaaaacaaa
gggcagaaacgtgatcaactttggccacaaatacgcgatcgccattataaccgggtcatt
aagctattaatcgcagtctttccggcaatacaacctgagcaggctcactggaaatcgtta
gttaaccacttaatgattgaggtctgggatgcaattcgaccctgcttacgtcagtttgag
tcgggttatcagctggatattaaacaacaagctgaattttacagtccaaagcaagtgtgg
cgttgcccctatactcgacgtgcgttagacgtcacgttgctgggatactctccgtatttg
ccgggtagcaaagaaattgcacctgaaaaagcagtgttgattgaaatgcctgagcttcct
gtacgtcactggcgtttgtctggtggtggagaaatcgcccgagaagaacgtctggagtgg
ctggaaagtaatgcgctgattcaacatgcccgcgaggaaggattatggtctactcgcagc
gaccgactggccctgaaagatagctggtatcgtctggaggaacactctgcgcagagaacg
cctgagcagaaccagtttaatgaaaaacaatttaagtcaggcaaagttaatgtgctgaac
tgttccacgaccatggagatgggggtggatattggtggtatgagtttggtggcaatgaac
aacgttcctccagcgccggcaaattatttgcaacgtgcaggtcgcgcggggcgtcgtgga
gagagtgcatctgctgccattacgttatgtaaaaacacggcgcatggaatggaggtattc
aaagaccccctctgggcgttcaacactactgccagtgcgccacgggttcgttttgggagc
agtagtattgttcaacgacatgttaatgccctggttttaggtctgtttttacgagctgaa
gttcctgatgcgacaaaactgagttgcaaatggttctttgaaggtgatgagagccagtgt
cttcgttttctccattggttaaatcaccaggccgatcagctggcggataaacttaaacgc
cttactcagggaaccgtactgatgtcattgacggcaacccagctcttgacccgcacacaa
gcaatgatgcagcaggttgatatccgctggagaagccaacttgcgatactgttggaaaat
atcgaagcgttgaaggcggataacagcgcgtgggaagaaacaccagcaggtaaagccatc
gcttatcagcttcgtgattatcgcggtgcatatctgttttctaaactcattagtgaagcg
ttcctgccggggcatggtttcccggttggcgtagtcaatttcaattatctgacggcagat
gagctggaaaaacgtcgcgcaataaaagccactcaggctgaccctaatgaagggggagaa
agcttttctcgtcgtattgaaaaattgcccagccgtgatttgcctacagcattacgcgag
tatgcgcctggtgcagatgtggtattgggcggaaaagtatatcgttcctcgggcattatg
cttggcaaggtgcttgccagcgggcaggagctgtcaggcgatcatcatattccgtggttc
tggcattgccgtaaatgtggtgcgggggcaaccagtactacccatcctgtcgaatgtagt
cactgcaaagcggatatacagcaacttgatgtgaagcgttatttacagcctgttggtttt
gcgacagatattcgttatcaggcacataatgatgtatccatgcctgcacaacttccctgg
aaagatccacgtgttcttgtaccgtcttcggtgtgggtttctttacccgatgctgggcta
ggacgttaccgttttagccatagtggggaattgttccacttcagtgaaggggaatttggg
cacggctacgcaatttgcctctcatgtggtcgggcagaatctcaaactcaaccccagcgt
acccctgaaaatctaaagaacccagagagggaaaatacgcattacctgttgcgagggggc
agtaacgatcgtcaggggagcaataaattgtgccacggtcatgtgcataaagatctgtgg
ttgggatatagcagtcgtacagatatggttgagctgcaactcaatgatgataatggcctg
ttgatccgtgatgaggttgccgcgcgttcccttgcggtcgctttgcgtgaagggttagcg
cataaattgggtatcgaaaatactgagctgggcgtgacgacgcagcaagcgcgcgatatc
aatggctataccggatattccatcttcatttacgacaataatgcgggtggtgcaggttat
gcagtgcaattgatcgaccattgggctgatgtctttaattacgccagaaaattgctcgat
tgcagttgcgataaattctgtcaccactgcttgctcagctacgacagtcagcattatgtc
aacagattagatcgtcaccatgcattaaccctgcttaccaatgtacggttgcagcgactt
aacctcgcgccagaatatcagtacttcggcgatggtagccgggttgaaactaaccctctg
agtttacgtattgcgcaatgcctgaacagcgagatttatgactcctgctcgctggttctt
gcggggccgcaggaacagtgggactttgcccaatggccattatttaaagagttgctccag
tttgcctcctccggtgggaatgttgagttgctggtggccacgccgctggcaaacttaact
gatagctccagacatcagctttccgcgttggcggcgatgccgggaggtcgcttacaagtg
aaatccattgccactgcgcagctcatgcaaggaaaggggcgctggcttgcgcaggtgact
cgcgaagggcaaagccaacagtgggccgcagacgacagcgctaccgttgcacctggtgaa
ttatggggacaaagtgcgtcttcaccagtagtgacacttaaaggaacgtccggaaaaacc
ttctcgggtcagaccttaagtgcagaagatttactgcccgccttacccaccggggcggtg
cgcatcaatctctgtgaacaactggacgggccgctggaaggttttggttcgcgtttctgg
tcgttagtcacgcaacagcacgctggctggaagcaggcatttacccgccacaaagagata
acgcatgttgagtacagcgatcgttatcttaatagcccattcacggcgcgtttgttaggt
gaaatcttaaccgagctggttgaacagggaatggcggaacgcgccagcctcactgtttgc
gtcaaaaaattggattacaactctcgccaacacgacgctctctataacgcgtggcttaat
gaggaagatcgtcagcaggttgtgaccactttacttgaagaaggatatctggggcctgcg
tggccgggagcaattagctggttaacgggggataaccagagtacggagcatggacgagaa
ctgacagtcaccttcagcgatggcagtcagcattatgtcctgctcgacatggggcttagc
tactggcgctgtattgaagataccttctttgattttgccctgcgagtaccgcagcaagtt
gaacggctggcaaacacgcgagcgcgagctgttgccccgggtaatgaccttaggagttat
attatcgctggataa
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