Escherichia coli O157 H7 Sakai (EHEC): ECs_5330
Help
Entry
ECs_5330 CDS
T00048
Symbol
holD
Name
(RefSeq) DNA polymerase III psi subunit HolD
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Pathway
ecs03030
DNA replication
ecs03430
Mismatch repair
ecs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECs_5330 (holD)
03430 Mismatch repair
ECs_5330 (holD)
03440 Homologous recombination
ECs_5330 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecs03032
]
ECs_5330 (holD)
03400 DNA repair and recombination proteins [BR:
ecs03400
]
ECs_5330 (holD)
Enzymes [BR:
ecs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECs_5330 (holD)
DNA replication proteins [BR:
ecs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ECs_5330 (holD)
DNA repair and recombination proteins [BR:
ecs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ECs_5330 (holD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_III_psi
CSTF_C
Motif
Other DBs
NCBI-GeneID:
913550
NCBI-ProteinID:
NP_313357
UniProt:
Q8XB47
LinkDB
All DBs
Position
5465976..5466389
Genome browser
AA seq
137 aa
AA seq
DB search
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRA
LTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQVASPALTELRANPTARAA
LWQQICTYEHDFFPRND
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccgacgagactggcagttacagcaactgggcattacccagtggtcgctgcgt
cgccctggcgcgttgcagggggagattgccattgcgatcccggcacacgtccgtctggtg
atggtggcaaacgatcttcccgccctgactgatcctttagtgagcgatgttctgcgcgca
ttaaccgtcagccccgatcaagtgctgcaactgacgccagaaaaaatcgcgatgctgccg
caaggcagtcgctgcaacagctggcggttgggtactgacgaaccgctatcactggaaggc
gctcaggtggcatcaccggcgctcaccgaattacgggcaaacccaacggcacgcgccgcg
ttatggcaacaaatttgcacatatgaacacgatttcttccctcgaaacgactga
DBGET
integrated database retrieval system
