KEGG   Escherichia coli O157 H7 Sakai (EHEC): ECs_5347
Entry
ECs_5347          CDS       T00048                                 
Symbol
radA
Name
(RefSeq) DNA repair protein
  KO
K04485  DNA repair protein RadA/Sms
Organism
ecs  Escherichia coli O157:H7 Sakai (EHEC)
Brite
KEGG Orthology (KO) [BR:ecs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecs03400]
    ECs_5347 (radA)
DNA repair and recombination proteins [BR:ecs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     ECs_5347 (radA)
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI DnaB_C Lon_C RecA Rad51 GvpD_P-loop AAA_22 SLFN-g3_helicase AAA_14 ABC_tran AAA_16 nSTAND3 AAA_24 AAA DUF7125 NTPase_1 cobW Zeta_toxin Zn_ribbon_Thio2 AAA_29 DZR Viral_helicase1 AAA_5 AAA_30 Herpes_Helicase PAXNEB
Other DBs
NCBI-GeneID: 913495
NCBI-ProteinID: NP_313374
UniProt: A0A0H3JJ52
LinkDB
Position
5482838..5484220
AA seq 460 aa
MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV
AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ
VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL
NT seq 1383 nt   +upstreamnt  +downstreamnt
gtggcaaaagctccaaaacgcgcctttgtttgtaatgaatgcggggccgattatccgcgc
tggcaggggcagtgcagtgcctgtcatgcctggaacaccatcaccgaggtgcgtcttgct
gcgtcgcctacggtggcgcgtaacgagcgtctcagcggctatgccggtagcgccggggtg
gcaaaagtccagaaactctccgatatcagccttgaagagctgccgcgtttttccaccgga
tttaaagagttcgaccgcgtactaggcggcggcgtggtgccaggaagtgccattctgatt
ggcggtaaccctggtgcggggaaatccacgctgctactgcaaacgctgtgcaaactggcc
cagcagatgaaaacgctgtatgtcaccggcgaagagtcgctgcaacaggtggcaatgcgc
gctcatcgccttggcctgccgactgacaatctcaatatgttgtcggaaaccagcatcgaa
cagatctgcctgattgccgaagaagagcaaccgaagctgatggtaattgactcgatccag
gtgatgcatatggcggatgtacagtcatcgcctggtagcgtggcgcaggtgcgtgaaacg
gcggcttatttgacacgcttcgccaaaacgcgcggtgtggcgattgtcatggtggggcac
gtaaccaaagatggttcgctggctggcccgaaagtgctggaacactgtatcgactgttcg
gtgcttttagatggcgatgccgactcccgttttcgcaccttgcgcagccataaaaaccgc
ttcggcgcggtgaatgagctgggcgtcttcgcgatgaccgaacaggggctgcgtgaagtc
agcaacccttcggcaattttcttaagtcgcggagatgaagtgacctccggcagctccgtg
atggtggtgtgggaaggaacgcgtccgttgctggtggagattcaggcgctggtcgatcac
tcgatgatggcgaatccgcgccgcgtggcagtggggctggaacaaaaccgtctggcaatc
ctgctggctgtcttgcaccgtcacggtggtctgcaaatggccgatcaggatgtgtttgtg
aacgtggtcggcggcgtaaaggtaaccgaaaccagcgccgacttagcgttactgctggcg
atggtttccagcctgcgtgacagaccgctaccgcaggatctggtggtgtttggtgaagtc
gggctggcaggggagatccgcccggtgcccagcggtcaggaacgaatctctgaagcggcg
aaacacggttttcgccgggcgattgttccggcggctaacgtaccgaaaaaagcgccggaa
gggatgcagatttttggcgttaaaaaactctccgacgcgcttagcgtgttcgacgactta
taa

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