Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_0285
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Entry
ECIAI39_0285 CDS
T00829
Symbol
sbcC
Name
(GenBank) exonuclease, dsDNA, ATP-dependent
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ect03400
]
ECIAI39_0285 (sbcC)
DNA repair and recombination proteins [BR:
ect03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECIAI39_0285 (sbcC)
Archaeal homologous recombinant proteins
ECIAI39_0285 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_15
ABC_tran
cobW
RsgA_GTPase
nSTAND3
AAA_21
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
CAR16425
UniProt:
A0A0H3MDD7
LinkDB
All DBs
Position
318354..321497
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGKISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLITAQQ
QEQQSLNWLTRLDELQQEGSRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA
EHSTALAHTRQQIEEVNTRLQSTMALRANIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQ
WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVASAQAQHAE
QRPLRQRLVALHGQIVPQQKRLAQLQVAIQNVTLEQTQRNAALNEMRQRYKEKMQQLADV
KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK
KLGEEGATLRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQP
WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE
DEEESWLATRQQEAQSWQHRQNELTALQNRMQQLTPILETLPQSDELPHCEETVVLENWR
QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT
QLEQLKQNLENQRRQAQTLVTQTAEALAQHQQHRPDGLDLSVTVEQIQQELAQTQQKLRE
NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG
LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLESAFAVK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctgaactcattaaaaggcgaatggaagatt
gatttcacccgcgagccgttcgccagcaacgggctgtttgccattaccggcccaaccggt
gcggggaaaaccaccctgctggacgccatttgtctggcgctgtatcacgaaactccgcgc
ctttctaacgtttcacaatcgcaaaatgatctcatgacccgcgataccgccgaatgtctg
gcggaggtggagtttgaagtcaaaggtgaagcgtatcgcgcgttctggagccagaatcgg
gcgcgtaaccagccggacggtaatttgcaggtgccacgcgtagagctggcgcgctgcgcc
gatggcaaaattctcgccgacaaagtgaaagataagctggaactgacggcgacgttaacc
ggactggattacgggcgcttcacccgttcgatgctgctttcgcaggggcaatttgctgcc
ttcctgaatgccaaacccaaagaacgcgcggaattgctcgaggagttaaccggcactgaa
atctacgggaaaatctcggcgatggtttttgagcagcacaaatcggcccgcacagagctg
gagaagctgcaagcgcaggccagcggcgtcgcgttgctcacgccagaacaagtgcaatcg
ctgacagcgagtttgcaggtacttactgacgaagaaaaacagttaattaccgcgcagcag
caagaacaacaatcgctaaactggttaacgcgtctggacgaattgcagcaagaaggcagc
cgccgtcaacaggccttgcaacaggcattagccgaagaagaaaaagcgcaacctcaactt
gcggcgctcagtctggcacaaccggcacgaaatcttcgtccgcactgggaacgcatcgca
gaacacagcacggcgctggcgcatactcgccagcagattgaagaagtaaatactcgctta
cagagcacaatggcgcttcgggcgaacattcgtcaccacgcggcgaagcagtcagcagaa
ttacagcagcagcaacaaagcctgaatgcttggttacaggaacacgaccgtttccgtcag
tggaacaacgaactggcgggttggcgtgcgcagttctcccaacaaaccagcgatcgcgag
catctgcggcaatggcagcaacagttaacccatgctgagcaaaaacttaatgcgcttgcg
gcgatcacgttgacgttaaccgccgatgaagttgctagcgcccaggcgcaacatgctgag
caacgcccactgcgtcagcgcctggtcgcgctgcatggacagattgttccccaacaaaaa
cgtctggcgcagttacaggtcgctatccagaatgtcactctggaacagacgcaacgtaac
gccgcacttaacgaaatgcgccagcgttataaagaaaagatgcagcaacttgccgatgtc
aaaaccatttgcgagcaggaagcacgcatcaaaacgctggaagcccagcgcgcgcagtta
caggcgggtcagccttgtccactttgtggttccaccagccacccggcggtcgaggcgtat
caggcgctggagcctggcgttaatcagtctcgattactggcgctggaaaacgaagttaaa
aagctcggtgaagaaggtgcgacgctacgtgggcaactggacgccttaacaaagcaactt
cagcgtgatgaaaacgaagcgcaaagcctccgacaagatgagcaagcacttactcaacaa
tggcaagccgtcacggccagcctcaatatcaccttgcagccacaggacgatattcaaccg
tggctagatgcacaagatgaacacgaacgccagctgcggttactcagccaacggcatgaa
ttacaagggcagattgccgcgcataatcagcaaattatccagtatcaacagcaaattgaa
caacgccagcagcagctcttaacggcattggcgggttatgcactgacattgccacaggaa
gatgaagaagagagctggttggcgacgcgtcagcaagaagcgcagagctggcagcatcgc
cagaacgaattaaccgcgctgcaaaaccgtatgcagcagctgacgccgattctggaaacg
ttgccgcaaagtgatgaactcccgcactgcgaagaaactgtggtactggaaaactggcgg
caggtacatgaacaatgtctcgcactacacagccagcaacagacgttacagcaacaggac
gttctggcggcgcaaagtctgcaaaaagcccaggcgcagtttgacaccgcgctacaggcg
agcgtctttgacgatcaacaggcgttccttgcggcgctaatggatgaacaaacactaacg
cagctggaacagctcaagcagaatctggaaaaccagcgccgtcaggcgcaaacgctggtc
actcagacagcagaagcgctggcacagcatcagcaacaccgacctgacggcctggatctc
agtgtgacggtggagcagattcagcaagagttagcgcaaactcagcaaaagttgcgtgaa
aataccaccagtcagggcgagattcgccagcagctgaagcaggatgcagacaaccgtcag
caacaacaaaccttaatgcagcaaattgctcaaatgacgcagcaggttgaggactgggga
tatctgaattcgctaataggttccaaagagggcgataaattccgcaagtttgcccagggg
ctgacgctggataatttagtccatctcgctaatcagcaacttacccggctgcacgggcgc
tatctgttacagcgcaaagccagcgaggcgctggaagtcgaggttgttgatacctggcag
gcagatgcggtacgcgatacccgtaccctttccggcggcgaaagtttcctcgtcagtctg
gcgctggcgctggcgctttcggatctggtcagccataaaacgcgtattgactcgctgttc
cttgatgaaggttttggcacgctggatagcgaaacgctggataccgcccttgatgcgctg
gatgccctgaatgccagtggcaaaaccatcggtgtgattagccacgttgaagcgatgaaa
gagcgtattccggtgcagatcaaagtgaagaagatcaacggcctgggctacagcaaactg
gaaagtgcgtttgcagtgaaataa
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