Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_0615
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Entry
ECIAI39_0615 CDS
T00829
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Pathway
ect03030
DNA replication
ect03430
Mismatch repair
ect03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECIAI39_0615 (holA)
03430 Mismatch repair
ECIAI39_0615 (holA)
03440 Homologous recombination
ECIAI39_0615 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ect03032
]
ECIAI39_0615 (holA)
03400 DNA repair and recombination proteins [BR:
ect03400
]
ECIAI39_0615 (holA)
Enzymes [BR:
ect01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECIAI39_0615 (holA)
DNA replication proteins [BR:
ect03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ECIAI39_0615 (holA)
DNA repair and recombination proteins [BR:
ect03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ECIAI39_0615 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CAR16752
UniProt:
A0A0H3MIP9
LinkDB
All DBs
Position
complement(648637..649668)
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AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTD
WNAIFSLCQAMSLFASRQTLLLLLPDNGPNAAINEQLLTLTGLLHDDLLLIVRGSKLSKA
QENAAWFTALANRSVQVTCQTPEQAQLPHWVAARAKQLNLELDDAANQVLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMGEALNRLSQPQLRQ
AVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcggttgtacccggaacaactccgcgcgcagctcaatgaagggctgcgcgcggcg
tatcttttacttggtaacgaccctctgttattgcaggaaagccaggacgctgttcgtcag
gtagctgcggcacaaggattcgaagaacaccacactttttccattgatcccaacactgac
tggaatgcgatcttttcgttatgccaggctatgagtctgtttgccagtcgacaaacgcta
ttgctgttgttacccgataacggaccgaatgcggcgatcaatgaacaacttctcacactc
accggacttctgcatgacgatctgctgttgatcgtccgcggtagtaaattaagcaaagcg
caagaaaatgctgcctggtttactgctcttgcgaatcgcagcgtgcaggtgacctgtcag
acgccggagcaggctcagcttccccactgggttgctgcgcgtgcaaaacagctcaactta
gaactggatgacgctgcaaaccaagtgctctgctactgttatgaaggtaacctgctggcg
ctggctcaggcactggagcgtttatcgctgctctggccagacggcaaactgacattacct
cgcgttgaacaggcggtgaatgatgccgcgcatttcaccccttttcattgggttgatgct
ttgttgatgggaaaaagtaagcgcgcgttgcatattcttcagcaactgcgtctggaaggc
agcgaaccggttattttgttgcgcacattacaacgtgaactgttgttactggttaacctg
aaacgccagtctgcccatacgccactgcgtgcgttgtttgataagcatcgggtatggcag
aaccgccggggcatgatgggcgaggcgttaaatcgcttaagccagccgcagttacgtcag
gccgtgcaactcctgacacgaacggaactcaccctcaaacaagattacggtcagtcagtg
tgggcagagctggaagggttatctcttctgttgtgccataaacccctggcggacgtattt
atcgacggttga
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