Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_2002
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Entry
ECIAI39_2002 CDS
T00829
Symbol
ymfC
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ect03009
]
ECIAI39_2002 (ymfC)
Enzymes [BR:
ect01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
ECIAI39_2002 (ymfC)
Ribosome biogenesis [BR:
ect03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECIAI39_2002 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAR18131
UniProt:
A0A0H3MRD0
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All DBs
Position
2053530..2054180
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AA seq
216 aa
AA seq
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MEFTMKYFSDSKSSFRKKQVSRLNSQHSTKRKPENQPTRVILFNKPYDVLPQFTDEAGRK
TLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDA
LEALRNGVTLNDGPTLPAGVDLVEEPEWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVR
RMTANVGFPTLRLIRYAMGDYSLDNLANGEWREATD
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
ttggaatttaccatgaaatactttagcgattctaaatcttcttttagaaaaaaacaggtt
agtcgactaaactcgcaacactccactaagcgtaaacctgaaaaccagcccacgcgtgtg
atcctgttcaataaaccctacgatgttcttccgcagttcaccgatgaagccggacgcaaa
acattaaaagaattcatcccggttcagggcgtttatgcggcaggtcgtcttgaccgcgat
agcgaagggttactggtgctgaccaataacggtgcgttgcaggcgcgtttaacccagccg
ggtaaacgcaccgggaaaatctattatgtgcaggtggaaggtattcccacacaagacgca
cttgaggccttgcgcaatggcgtgaccttaaatgatggccctaccctgcccgcaggcgtg
gacctggttgaagagccggagtggttatggccgcgtaatccgccgattcgtgaacgtaaa
agtattcccaccagctggctgaagattactttatatgaaggacgtaatcgccaggtgcgc
cgcatgaccgccaatgttggtttccccacgctgcgactgattcgctatgcgatgggtgat
tactctttggataatcttgccaacggcgaatggcgagaagcgacagattaa
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