Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_2062
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Entry
ECIAI39_2062 CDS
T00829
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Pathway
ect03030
DNA replication
ect03430
Mismatch repair
ect03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECIAI39_2062 (holB)
03430 Mismatch repair
ECIAI39_2062 (holB)
03440 Homologous recombination
ECIAI39_2062 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ect03032
]
ECIAI39_2062 (holB)
03400 DNA repair and recombination proteins [BR:
ect03400
]
ECIAI39_2062 (holB)
Enzymes [BR:
ect01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECIAI39_2062 (holB)
DNA replication proteins [BR:
ect03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ECIAI39_2062 (holB)
DNA repair and recombination proteins [BR:
ect03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ECIAI39_2062 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
Motif
Other DBs
NCBI-ProteinID:
CAR18189
UniProt:
A0A0H3MLT6
LinkDB
All DBs
Position
complement(2109930..2110934)
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AA seq
334 aa
AA seq
DB search
MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGEDALIYALSRYLLCQQPQGHKSCG
HCRGCQLMQAGTHPDYYTLAPEKGKNALGIDAVREVTEKLNEHARLGGAKVVWVTDAALL
TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV
TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVQSGDWYSLLAALNHEQ
APARLHWLATLLMDALKRHHGAAQVTNVDVPGLVVELANHLSPSRLQAILGDVCHIREQL
MSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagatggtatccatggttacgacctgatttcgaaaaactggtagccagctatcaggcc
ggaagaggtcaccatgcgctactcattcaggcgttaccgggtatgggcgaggatgcttta
atctacgccctgagccgttatttactctgccaacaaccgcagggccacaaaagttgcggt
cactgtcgtggatgtcagttgatgcaggctggcacgcatcccgattattacaccctggct
cccgagaaagggaaaaatgcgctgggcattgatgcggtacgtgaagtcaccgaaaagtta
aatgagcacgcacgcttaggtggtgcgaaagttgtctgggtaaccgatgctgccttactg
actgacgccgcggctaacgcattgctgaaaacgcttgaagagccaccagcagaaacctgg
tttttccttgctacccgcgagcctgaacgtttactggcaacattacgtagtcgttgtcgg
ttacattaccttgcgccgccgccggaacagtacgccgtgacctggctttcacgcgaagtg
acaatgtcacaggatgcattacttgccgcattgcgtttaagcgccggttcgcctggcgcg
gcactggcgttgtttcagggagataactggcaggctcgtgaaacattgtgtcaggcgttg
gcatatagcgtgcaatcgggcgactggtattcgctgctggcggcccttaatcatgaacaa
gctccggcgcgtttacactggttggcaacgttgctgatggatgcgctaaaacgccatcat
ggcgctgcgcaggtgaccaatgttgatgtgccgggcctggtcgtcgaactggcaaaccat
ctttctccctcgcgcctgcaggctatactgggggatgtttgccacattcgtgaacagtta
atgtctgtcacaggtattaaccgcgagcttctcatcaccgatcttttactgcgtattgag
cattacctgcaaccgggcgttgtgctaccggttcctcatctttaa
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