Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_2142
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Entry
ECIAI39_2142 CDS
T00829
Symbol
rutR
Name
(GenBank) DNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ect03000
]
ECIAI39_2142 (rutR)
Transcription factors [BR:
ect03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ECIAI39_2142 (rutR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
CAR18269
LinkDB
All DBs
Position
complement(2188989..2189627)
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AA seq
212 aa
AA seq
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MTQGAVKITGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaggcgcagtgaaaataacgggtaaacgttcgcgcgcagtaagcgcgaagaaa
aaagcgattcttagcgcagcactggacactttttcacaattcggttttcacggcacaagg
ctggagcagatcgcagagttggcaggcgtttcaaaaaccaatctgctgtattacttcccg
tcaaaagaggcgctgtatatagccgtactgcggcagattctcgatatctggctggcaccg
ttaaaagcgtttcgagaagatttcgccccgctggcggcgatcaaagaatacatccgtctg
aagctggaagtttcccgcgattatccgcaggcttcgcgcctgttctgtatggagatgctg
gcaggcgcgccgttgttaatggatgaactgacgggcgatttgaaggcattaattgatgag
aaatccgcgctgattgccggttgggtaaaaagcggcaaactcgcgccgattgacccgcag
catttgatttttatgatttgggcttccactcaacattacgccgatttcgcccctcaggtg
gaggcggtgacaggcgcgacgttgcgcgatgaggtatttttcaatcaaacggttgaaaac
gtgcagcggataattattgaggggattcgaccacgttaa
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