Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_2243
Help
Entry
ECIAI39_2243 CDS
T00829
Symbol
ycaO
Name
(GenBank) conserved hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ect03009
]
ECIAI39_2243 (ycaO)
Ribosome biogenesis [BR:
ect03009
]
Prokaryotic type
ribosomal protein modification factors
ECIAI39_2243 (ycaO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
CAR18370
LinkDB
All DBs
Position
2298991..2300751
Genome browser
AA seq
586 aa
AA seq
DB search
MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANSPFVHYPNEKWFPLTENDDVPEG
LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQIVYIPMNIIGNLYVS
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWSFSGTTEEEFATLM
AIFKKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS
EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA
SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacatttatccccggcaaagatgccgcactggaagattccatcgctcgcttc
cagcaaaaactttcagacctcggctttcagattgaagaggcctcctggctgaatcccgtg
cctaacgtctggtctgtacatattcgcgacaaagagtgcgcactgtgttttaccaacggt
aaaggcgcaaccaaaaaagcggcgctggcttctgcactcggtgaatatttcgagcgtctc
tcaaccaactacttttttgctgacttctggctgggcgaaaccatcgccaacagtccattc
gtgcattatcccaacgaaaaatggttcccactgaccgaaaacgacgatgtaccagaaggg
ctgctcgatgaccgtctgcgcgcattttacgatccggagaatgaactgaccggcagcatg
ctgattgacctacaatccggtaacgaagatcgtggtatttgcggtctgccgtttacgcgc
cagtccgacaatcagatcgtttatattccgatgaatatcattggtaacctgtacgtttct
aacggtatgtccgctggcaatacccgaaacgaagcacgcgttcaggggttgtccgaagtt
ttcgaacgctacgtgaaaaaccgcattattgctgaaagcatcagcttgccggaaatcccg
gcagacgtgctggcgcgttacccagcggtggttgaagccatcgaaacgctggaagcagaa
ggtttcccaatctttgcttatgatggttcgcttggcggccagtatccggtgatttgcgtg
gtactgttcaatcctgctaacggtacctgctttgcctctttcggtgcgcatcctgatttt
ggcgtagcactggaacgtaccgtgaccgagctgctgcaaggtcgtggcctgaaagatttg
gatgtgtttactccgccaaccttcgatgatgaagaagttgctgaacataccaacctcgaa
acgcactttatcgattccagcggtttaatctcctgggacctgttcaagcaggatgccgat
tatccgtttgttgactggagcttctccggcaccacggaagaagagttcgccacgctgatg
gctatcttcaaaaaggaagataaagaagtttatattgccgattacgagcatctgggtgtc
tacgcttgccgtattatcgtgcctggcatgtccgatatttatccggctgaagatctgtgg
ctggcgaataacagtatgggcagccatttacgtgaaaccattctctcgctaccaggcagc
gagtgggaaaaagaagattacctgaaccttatcgagcaactggatgaagaaggttttgat
gactttactcgcgtgcgtgagctgttgggtctggcgaccgggtcggataacggttggtac
accctgcgtatcggagaattaaaagccatgctggcgctggctggtggcgatctggaacag
gctctggtctggaccgaatggacgatggagtttaactcatcagtatttagtccggaacgc
gccaactattatcgctgcctgcaaacgttgttattactggcgcaggaagaagatcgccag
ccactgcaatatttgaatgcgtttgttcgcatgtacggtgcagatgccgtggaagccgcc
agtgcggcaatgagcggcgaagcggcgttttatggcttgcaacccgtagatagcgatctg
cacgcgtttgctgcacatcagtcgttgttgaaggcctacgaaaagctgcaacgcgccaaa
gcagcattctgggcaaaataa
DBGET
integrated database retrieval system
