Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_2978
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Entry
ECIAI39_2978 CDS
T00829
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Pathway
ect00300
Lysine biosynthesis
ect00470
D-Amino acid metabolism
ect01100
Metabolic pathways
ect01110
Biosynthesis of secondary metabolites
ect01120
Microbial metabolism in diverse environments
ect01230
Biosynthesis of amino acids
Module
ect_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ECIAI39_2978 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ECIAI39_2978 (dapF)
Enzymes [BR:
ect01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ECIAI39_2978 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
CAR19097
UniProt:
B7NTD3
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All DBs
Position
complement(3082734..3083558)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcaccggagctgattcgtcgcctggctgatcggcacctgggggta
gggtttgaccaactgctggtggttgagccgccgtatgatcctgaactggattttcactat
cgcattttcaatgctgatggcagtgaagtggcgcagtgcggcaacggagcacgctgcttt
gcccgttttgtgcgtctgaaagggctgaccaataagcgcgatatccgcgtcagcaccgcc
aacgggcggatggttcttaccgtcaccgatgatgatctggtccgcgtaaatatgggcgaa
cccaacttcgaaccttctgccgtgccgtttcgcgctaacaaagcggaaaagacctatatt
atgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccgcattgc
gtgattcaggtcgatgatgtcgataccgcggcggtagaaacgcttggtcctgttctggaa
agccacgaacgtttcccggagcgcgccaatatcggttttatgcaagtggttaagcgcgag
catattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagcggc
gcgtgtgcggcggtggcggtagggattcagcaaggtttgctggccgaagaagtacgcgtg
gaactccccggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatatatg
actggcccggcggtacatgtctacgacggatttattcatctatga
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