Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_3238
Help
Entry
ECIAI39_3238 CDS
T00829
Symbol
recD
Name
(GenBank) exonuclease V (RecBCD complex), alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Pathway
ect03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECIAI39_3238 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ect03400
]
ECIAI39_3238 (recD)
Enzymes [BR:
ect01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ECIAI39_3238 (recD)
DNA repair and recombination proteins [BR:
ect03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECIAI39_3238 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
NAT10_TcmA_helicase
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
MukB
PhoH
AAA_28
DEAD
CbiA
UvrD_C
FtsK_SpoIIIE
T2SSE
Bcl-2
SRP54
TrwB_AAD_bind
NTPase_1
AAA
NPHP3_N
ATPase
Motif
Other DBs
NCBI-ProteinID:
CAR19357
UniProt:
A0A0H3MKB5
LinkDB
All DBs
Position
complement(3379167..3380993)
Genome browser
AA seq
608 aa
AA seq
DB search
MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLEN
NEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVA
RFFNEVNHAIEVDEALLAQTLDKLFPVSDDINWQKVAAAVALTRRISVISGGPGTGKTTT
VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQ
LASVEAGAVLGDICAYANAGFTAERAGQLSCLTGSHVPAGTGTEAASLRDSLCLLQKSYR
FGSDSGIGQLAAAINRGDKTAVKTVFQQDFSDIEKRLLQSGEDYIAMLEEALAGYGCYLD
LLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGR
PVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHK
SQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGL
AALFSSRG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcaaaagcaattactggaagctgtggagcacaaacagctacgcccgctggac
gtgcagtttgccctgaccgtggcgggagatgaacatcctgccgtcaccctcgcggcggca
ctgttaagtcatgatgccggagagggacacgtctgtttgccgctttcacgactggaaaat
aacgaggcatcgcatccgctgttggcgacctgtgtcagtgaaatcggtgagctacaaaat
tgggaagaatgcttgctggcttcacaagcggtcagccggggagatgaaccaacgccgatg
atcctctgtggcgatcgtctttatttgaatcgcatgtggtgtaacgagcgcacagtggca
cgctttttcaacgaagtgaatcatgccattgaggttgatgaagctctactggcgcaaacc
ctggacaaactttttccagtaagcgatgacattaactggcaaaaagtggcggcagcagtg
gcgctgacgcggcggatctcggtgatttccggcggccctggcaccggtaaaacgaccacc
gtagcgaagttgctggcagcgttaattcaaatggccgacggagaacgctgtcgtatccgt
ctggctgcaccaacgggtaaagctgccgcgcgcttaaccgaatctctcggcaaggctttg
cgccagttaccgctgaccgatgaacaaaagaaacgcattccggaagatgccagtactttg
caccgattgctgggcgcgcagccaggtagccagcgtttacgccatcatgccggtaacccg
ctgcatcttgatgtgctggtggtggatgaagcgtcaatgatcgatctccccatgatgtcg
cgcctgatcgatgcgttgcccgatcatgccagagtgatcttcctcggcgatcgcgatcaa
ctggcctcagttgaggctggagctgtgctgggcgatatctgcgcttatgccaacgcaggc
tttaccgccgagcgtgccgggcaattaagttgtctgacgggaagtcatgttccggcagga
actggtacagaagcagcatctttacgcgacagtctttgcctgctgcaaaaaagctatcgt
ttcggcagcgattctggcattggtcagttagctgcggcgatcaaccgtggtgataaaacg
gcagtgaaaaccgtttttcagcaggatttttctgatatcgaaaaacggcttttacagagc
ggcgaagattatattgcgatgcttgaggaagctcttgcgggttacggatgttatctggat
ctgctgcaagcgcgtgccgagccggatttaatcattcaggcgttcaatgagtaccagctt
ttgtgcgccctgcgggaagggccgtttggcgtggctggactgaatgagcgaattgagcag
tttatgcaacagaagcgcaaaattcatcgtcatccgcactctcgttggtacgaaggccga
ccggtgatgattgcccgtaatgacagcgcacttgggttgtttaatggcgatatcggtatt
gcgctggatcgcgggcaggggacgcgcgtctggtttgcgatgccggacggcaatattaag
tctgtgcaaccgagtcgcttgccagagcacgaaacgacgtgggcgatgacggtacataaa
tcgcagggatcggagttcgaccatgcggcgttgattttaccgagccaacgcacgccagta
gtaacacgagagctggtttacactgcggtgacccgcgcgcgtcgccgtctgtcgctgtat
gccgatgagcgcattttaagtgcggcaattgccacgcgcaccgagcggcgcagcggtctg
gcggcgttgtttagttcacggggataa
DBGET
integrated database retrieval system
