Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_3661
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Entry
ECIAI39_3661 CDS
T00829
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Pathway
ect03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECIAI39_3661 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ect03019
]
ECIAI39_3661 (pnp)
03016 Transfer RNA biogenesis [BR:
ect03016
]
ECIAI39_3661 (pnp)
Enzymes [BR:
ect01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ECIAI39_3661 (pnp)
Messenger RNA biogenesis [BR:
ect03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECIAI39_3661 (pnp)
Transfer RNA biogenesis [BR:
ect03016
]
Prokaryotic type
tRNA degradation factors
ECIAI39_3661 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_PDCD11
KH_2
OB_RRP5_4th
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
CAR19777
UniProt:
B7NKN3
LinkDB
All DBs
Position
complement(3818797..3821001)
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AA seq
734 aa
AA seq
DB search
MRRRSGINTSAVRYCLRKRKDITLLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDD
TAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDR
PIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYI
NDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQ
NINELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSET
IATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRT
HGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPK
RREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPI
KAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKE
IMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIR
ALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGA
FVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQ
PAAAPEAPAAEQGE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaagatcgggtattaacaccagtgccgtaaggtactgtctaagaaagagaaag
gatattacattgcttaatccgatcgttcgtaaattccagtacggccaacacaccgtgact
ctggaaaccggcatgatggctcgtcaggctactgccgctgttatggttagcatggatgac
accgcggtattcgttaccgttgttggccagaaaaaagccaaaccaggtcaggacttcttc
ccactgaccgttaactatcaggagcgtacctacgctgctggtcgtatcccgggtagcttc
ttccgtcgtgaaggccgcccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgc
ccgattcgcccgctgttcccggaaggcttcgtcaacgaagttcaggttatcgccaccgtg
gtttctgttaacccgcaagttaacccggatatcgtcgcgatgattggtgcttccgcagca
ctgtctctgtctggtattccgttcaatggtccgattggtgctgcccgcgtaggttacatc
aatgaccagtacgtactgaacccgactcaggacgagctgaaagagagcaaactggatctg
gttgttgcgggtactgaagccgctgtactgatggttgaatctgaagctgaactgctgagc
gaagaccagatgttgggcgcagtagtgtttggtcatgaacaacagcaggttgtcattcag
aacatcaatgaactggtgaaagaagccggtaaaccgcgttgggactggcagccggagccg
gtaaacgaagcgctgaacgcgcgcgttgctgcactggctgaagctcgtctgagcgatgct
taccgcatcaccgacaaacaagagcgttatgcgcaggttgatgtcatcaaatctgaaacc
atcgcgacgctgcttgctgaagatgaaaccctggacgaaaacgaactgggtgaaattctg
cacgctatcgagaaaaacgttgttcgtagccgcgtactggcaggcgaaccgcgtatcgac
ggtcgtgaaaaagatatgattcgtggtctggatgtgcgtactggcgtgctgccgcgtact
cacggttctgcgctgttcacccgtggtgaaactcaggcgctggttaccgcaacgctgggt
actgcacgtgacgcgcaggttcttgatgaactgatgggcgaacgtactgacaccttcctg
ttccactacaacttccctccgtactccgtaggcgaaaccggcatggtcggttctccgaag
cgtcgtgaaattggtcacggtcgtctggcgaagcgcggcgtgctggcagtcatgccggat
atggacaaattcccgtacaccgtacgtgtggtgtctgaaatcaccgaatccaacggttct
tcttctatggcttccgtgtgcggcgcgtctctggcgctgatggacgcaggtgtgccgatc
aaagctgctgttgcgggtatcgcaatgggtctggtgaaagaaggcgacaactacgttgta
ctgtctgacattttgggcgacgaagatcacctgggcgatatggacttcaaagttgcgggt
tcccgcgacggtatctctgcattgcagatggatatcaaaattgaaggtatcaccaaagag
atcatgcaggttgcgctgaaccaggctaaaggtgctcgtctgcatatcctgggcgtaatg
gaacaggcgatcaacgcgccgcgcggcgatatctctgagttcgctccgcgtatccatacc
atcaagatcaacccggacaagatcaaagacgttatcggtaaaggcggctctgttatccgt
gccctgaccgaagaaaccggcaccaccatcgaaatcgaagatgacggtactgtgaagatc
gcagcgaccgacggcgagaaagcgaaacacgctattcgtcgtatcgaagagatcactgca
gaaattgaagtgggccgcgtctacactggtaaagtgacccgtatcgttgacttcggcgca
tttgttgccatcggcggcggtaaagaaggtctggtacacatctctcaaatcgctgataaa
cgcgttgagaaagtgaccgattacctgcagatgggtcaggaagtaccggtgaaagtgctg
gaagttgatcgccagggccgtatccgtctgagcattaaagaagcgactgagcagtctcaa
cctgctgcagcaccggaagctccggctgctgaacagggcgagtaa
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