Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_3917
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Entry
ECIAI39_3917 CDS
T00829
Name
(GenBank) conserved hypothetical protein; putative superfamily II DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Pathway
ect03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECIAI39_3917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ect03019
]
ECIAI39_3917
03400 DNA repair and recombination proteins [BR:
ect03400
]
ECIAI39_3917
Enzymes [BR:
ect01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECIAI39_3917
Messenger RNA biogenesis [BR:
ect03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECIAI39_3917
DNA repair and recombination proteins [BR:
ect03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECIAI39_3917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
MarR_2
Motif
Other DBs
NCBI-ProteinID:
CAR20029
UniProt:
A0A0H3MR16
LinkDB
All DBs
Position
complement(4074430..4076526)
Genome browser
AA seq
698 aa
AA seq
DB search
MEKHGAELLLQRMLGNTTATFREGQWEAIDAVVNQRRKLLVVQRTGWGKSAVYFIASKIF
RDRGAGPTIIISPLLALMRNQVAAAERLGITAETLNSTNREEWQRISDKLLQGEVDCLLV
SPERLANQDFIETVLYPIADRIGLLVVDEAHCISDWGHDFRPDYRRILDILRQLPANTPV
LGTTATANNRVVEDIRQQLGDIVIQRGTLARESLALDALVLGEQSSRLAWLATVIPQFSK
SGIVYTLTTRDAELVAEWLRKNGISAFAYYSGVTCEGAEDSNTAREYLEQALLANKIKVL
VATTALGMGFDKSDLGFVIHYQMPGSIVGYYQQVGRAGRAIDSAVGILLCGGEDRAIHQF
FRESAFPAEAQIHEILNVLSENDGLTLRGIEQRTNLRYGQIEKALKLLVAENPSPVVYTE
KLWRRTIVSFSPDHERINHLMNQRKSELADVESYITTKECKMQFLRRALDEPSAERCGKC
SSCLQHPLLSPDIDSGLLHAANLFIKHADLPLNLNKQVAAGAFTQYGFKGNLPAGLQGST
GRILSRWGDSGWGKQVAQEKKTGRLSDELVEACAEMVCQRWNPHPEPTWVCSVPSLRHLD
LVPDFARRLAAKLGLPFIDAIEKVVDNPPQKMQQNRFHQCQNLDGAFVITPPLMPGPALL
VDDIVDSAWTLTVLTALLRQAGCPTVYPLALASTSVKN
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcacggagctgaattgcttttacagcggatgttaggaaataccaccgctact
ttcagggaagggcaatgggaagccatagatgcagtggttaatcagcggcgaaaactgctg
gttgtacagcgcaccggctgggggaaaagtgccgtgtacttcatcgccagtaaaatcttc
cgagatcgcggcgctggcccgacaattatcatctctcctttgcttgccctgatgcgtaac
caggttgccgccgctgaacggttaggtattacggctgaaacgttgaattctacaaacagg
gaagaatggcagcgcattagcgataagttgctgcaaggtgaggtcgattgcttgctggtt
tccccggaacgtttggcaaaccaggactttatcgaaacggttttatatcctatagccgat
cgtattggcttgcttgtggtcgacgaggcgcactgcatctctgattggggccacgatttt
cgcccggattaccgacgtatattagatattttgcgccaactgcctgcgaatacccctgtt
ctgggtacaaccgcgacagcgaataaccgtgttgttgaggatatccgtcagcaattgggt
gacattgtgattcagcgtggaacgctggctcgcgaaagtttggcgcttgatgccttagtc
ttaggagaacagtcatcccgtctggcatggttagcaacggttatccctcagttttccaaa
tcgggaattgtttataccctgacgactcgcgatgctgaacttgtcgccgagtggttaagg
aaaaatggtatcagtgcatttgcttactacagcggcgtgacttgtgaaggcgcggaagat
tctaatactgccagggaatatctggagcaggcactgctggcaaataaaatcaaagtgctg
gtcgcgacgacggcattaggtatggggtttgataaatctgatttaggtttcgtcattcat
tatcagatgccggggtctattgtcggttactaccaacaggtggggcgtgccgggcgtgct
atagattccgcagttggcatattgctttgtggtggtgaagaccgcgctattcatcaattc
ttccgtgaaagcgcctttcctgcggaggcgcaaattcatgaaatactcaacgtacttagc
gagaatgacggtcttaccctacgaggcattgaacaacggacgaatcttcgttatgggcaa
atagaaaaagcactgaaattattggtagcggaaaatccatcgcctgtggtgtataccgag
aaattatggcgcagaactatcgtcagtttttctcctgatcatgaacgaattaaccatttg
atgaatcagagaaaaagtgaactggcagacgttgaaagctatatcacgaccaaggagtgc
aaaatgcaatttctgcgccgtgcactcgatgagccaagtgccgaacgttgtggtaaatgt
agcagttgtcttcagcatccgttattgtcgcccgacattgatagcggcttactccatgcg
gcaaatttatttattaaacacgctgacctgccgttaaatctcaataaacaggtggcagct
ggggcttttacgcaatacggatttaaagggaacttgcctgcgggtttacaaggatctacg
gggcgaatcctttctcgttggggagattccgggtggggaaagcaggtagcacaggagaaa
aaaacggggcgcttaagtgatgagctggtagaagcatgtgcggaaatggtttgccaacgc
tggaatccgcatcctgaaccaacctgggtatgcagcgttccttcattaaggcacctcgac
ctggttcctgattttgcccggcgactggcggcgaaacttggcttaccttttattgatgcc
attgaaaaagtcgtggacaatccaccgcagaaaatgcagcaaaaccgttttcaccagtgt
caaaatctcgacggggcgtttgtgattacccctcctttgatgccaggtccggcgttgctg
gttgacgatatcgtggattctgcatggacgctgacagttctgacagcactgttacgacag
gcaggttgcccgacggtttatcctcttgcccttgcttctacctcggtaaaaaattga
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