Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_4171
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Entry
ECIAI39_4171 CDS
T00829
Symbol
rpoZ
Name
(GenBank) RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Pathway
ect03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ECIAI39_4171 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ect03021
]
ECIAI39_4171 (rpoZ)
03400 DNA repair and recombination proteins [BR:
ect03400
]
ECIAI39_4171 (rpoZ)
Enzymes [BR:
ect01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ECIAI39_4171 (rpoZ)
Transcription machinery [BR:
ect03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ECIAI39_4171 (rpoZ)
DNA repair and recombination proteins [BR:
ect03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ECIAI39_4171 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CAR20278
UniProt:
B7NQ13
LinkDB
All DBs
Position
4340188..4340463
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN
NQILDVRERQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctggta
ctggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccg
gaagaaaacgataaaaccactgtaatcgcgctgcgcgaaattgaagaaggtctgatcaac
aaccagatcctcgacgttcgtgaacgccaggaacagcaagagcaggaagccgctgaatta
caagccgttaccgctattgctgaaggtcgtcgttaa
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