Ectobacillus sp. JY-23: MUG87_02475
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Entry
MUG87_02475 CDS
T09162
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecto
Ectobacillus sp. JY-23
Pathway
ecto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUG87_02475 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecto03019
]
MUG87_02475 (recQ)
03400 DNA repair and recombination proteins [BR:
ecto03400
]
MUG87_02475 (recQ)
Enzymes [BR:
ecto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUG87_02475 (recQ)
Messenger RNA biogenesis [BR:
ecto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUG87_02475 (recQ)
DNA repair and recombination proteins [BR:
ecto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MUG87_02475 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HHH
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UOY93022
LinkDB
All DBs
Position
complement(459600..461708)
Genome browser
AA seq
702 aa
AA seq
DB search
MLAKAKQYLQQYFGYESFRNGQEEIITRVLSGYNTAGIMPTGGGKSICYQIPALVLPGIT
LVISPLISLMKDQVDALEQVGISATYLNSSLSMKETRERMHDIQHGIYKMLYIAPERLES
SAFLEQLKELPVSLVAVDEAHCISQWGHDFRPSYLRIQHLLTQFPKQPTVLALTATATPQ
VREDICEVLGIVSESAIVTGFARMNLSFKIVKGQNRLAYVKRYIETNKNEASIIYAATRK
EVDHVYEFLQKQGIRAGRYHAGMSDGERARQQDLFLQDDIAVMVATNAFGMGIDKSNVRS
VLHYQLPKNMESYYQEAGRAGRDGLDSECILLFSPHDIQVQRYLIEQSHHKEQKKQELHK
LRQMKDYCYTEGCLQSFILQYFGENDPKPCGRCSNCVDARTSVDVTRDAQMVLSCMIRMG
ERFGKTIISQVLTGSSNKKVLELGFDKLTTYGIMKDRAAKDVADLIDFLTSEQYIGVTDG
QYPVLFVSNEGKEVLLGKTQVLRKEQVRIVQVSTDDALFEMLRGLRKEIADEEGVPPFVI
FSDQTLRDMAAKLPQTTEEILSVKGVGQQKQERYGKRFIAIIDRYVTENGVMPSSQRVVT
KEKKEASHLVSYALYKQGYTLRDIAQERNLSLLTIENHILQCAEEGKEVQWEHFLSQEQE
ATIRKVIIELGGEKLKPLKEALPEDVSYFAIKTVLVKMRLNQ
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgcaaaagcgaaacaatatttacaacagtactttggttacgaatcgtttcggaac
ggacaagaggaaatcattacacgtgtattatcaggttataacacggctgggattatgcca
actggtgggggaaagtccatttgctatcaaattcccgcgcttgttctccctggtattacc
ctcgtcatatcaccgcttatttctctcatgaaagatcaagtcgatgctctcgaacaagtt
ggtatctctgccacatatttaaacagtagcttgtcgatgaaggagacaagggagcgtatg
catgatatacagcatggtatatataaaatgttgtatattgcaccggaacgactggaatct
tctgcttttctagagcaattaaaagagctccccgtttcactggtcgcagttgatgaagct
cattgtatctcacagtgggggcacgattttcgacctagttatttacgaatccagcatttg
ttaacacaatttccaaaacagccgacggttttagcactgacagcaactgcaaccccgcag
gtacgagaggatatttgtgaggttttgggcatcgtttctgagagtgcaattgtaactgga
tttgctcggatgaatctctcttttaaaattgtaaaggggcaaaatcgcttagcgtatgtg
aagagatatatagaaacaaataaaaatgaagcaagcatcatttacgccgctactcgtaaa
gaagtagatcatgtatatgaatttttacaaaagcagggtatacgtgcgggacgttatcat
gctgggatgagcgatggcgaaagagcaaggcaacaggatttgtttctgcaagatgatatt
gctgtaatggtggcaacaaatgcctttggaatggggattgacaaatcaaatgtgcggagt
gttcttcattatcaactccctaaaaatatggagagctactaccaggaggcggggcgtgcc
ggacgtgacggtctagatagtgagtgcattttgttgttttcaccgcatgatatacaagta
cagcgctatctcattgaacaatctcatcataaagagcagaaaaaacaggagcttcataag
ctgcgtcagatgaaggattattgttatacagaaggatgcttgcagagctttattcttcaa
tactttggagaaaatgacccgaagccgtgcggacgttgcagcaattgtgttgatgcacgt
actagcgtagatgtgacacgcgatgcacaaatggtactttcctgtatgattcgaatggga
gaaaggtttggtaaaactataattagtcaagttcttaccggctcatctaataaaaaggtg
ctcgaattaggttttgataagctgactacatatggcattatgaaagaccgtgcagcaaag
gatgtagctgatttgattgattttcttacatccgagcaatatattggcgttacagatggg
caatatccggttttatttgtgagtaatgaaggaaaagaagtattacttggaaaaacacaa
gtactacgaaaggaacaagtgcgaattgtacaagtttctactgatgatgctttatttgaa
atgctgcgcggactacgtaaggaaattgccgatgaagaaggtgtaccaccgttcgttatt
ttctctgatcagacacttcgtgatatggcagcaaaactaccacaaacgactgaagaaatc
ctcagtgtaaaaggcgtcggtcagcaaaagcaagagcgctacgggaagcgttttatagct
attattgataggtatgtgactgaaaatggcgtaatgccgtccagccaaagggttgtaacg
aaggaaaagaaagaagcttcacatcttgtaagttatgcgttatacaagcaaggctacact
ttacgagatattgcccaagaacgaaatttatccttgcttacaattgaaaatcacatcttg
caatgtgcggaggaaggaaaagaagtacagtgggaacattttctttcacaggagcaggaa
gcaacaatacgaaaagtaatcatagaactgggcggcgagaaattaaaaccgctgaaagaa
gcattacctgaagatgtaagttactttgctattaaaactgttctagtgaaaatgcgattg
aatcaataa
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