Ectobacillus sp. JY-23: MUG87_07685
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Entry
MUG87_07685 CDS
T09162
Symbol
gcvPB
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase subunit GcvPB
KO
K00283
glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:
1.4.4.2
]
Organism
ecto
Ectobacillus sp. JY-23
Pathway
ecto00260
Glycine, serine and threonine metabolism
ecto00630
Glyoxylate and dicarboxylate metabolism
ecto00670
One carbon pool by folate
ecto00785
Lipoic acid metabolism
ecto01100
Metabolic pathways
ecto01110
Biosynthesis of secondary metabolites
ecto01200
Carbon metabolism
Module
ecto_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MUG87_07685 (gcvPB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MUG87_07685 (gcvPB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MUG87_07685 (gcvPB)
00670 One carbon pool by folate
MUG87_07685 (gcvPB)
Enzymes [BR:
ecto01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
MUG87_07685 (gcvPB)
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Gene cluster
GFIT
Motif
Pfam:
GcvP2_C
GDC-P
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
UOY93979
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Position
complement(1472779..1474236)
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AA seq
485 aa
AA seq
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MTNQDQPLIFEISQPGRIGYSLPELDVEMVDLSEIFDSAYIRQEEPELPEVSELDIMRHY
TALSRRNHGVDSGFYPLGSCTMKYNPKINENVARFPGFSYIHPLQDESTVQGALELMYDL
QEHLKEITGMDEVTLQPAAGAHGEWTGLMLIRAYHEARQDFKRTKVIVPDSAHGTNPASA
TVAGFETITVKSNEAGLVDLEDLKRVVDEHTAALMLTNPNTLGLFEEHILEMAEIVHEAG
GKLYYDGANLNAVLSKARPGDMGFDVVHLNLHKTFTGPHGGGGPGSGPVGVKADLIPYLP
KPILEKTSEGYRFNYDRPQSIGRVKPYYGNFGINVRAYTYIRSMGPDGLKRVTEEAVLNA
NYMMRRLAPYYDLPFDKHCKHEFVLSGRRQKKLGVRTLDIAKRLLDFGYHPPTIYFPLNV
EECIMIEPTETESKETLDAFIDAMIQIAKEAEENPEIVQEAPHTTVIKRLDETMAARKPI
LKFEK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcaagaccaaccgctcatttttgaaatcagccaaccgggacgcattggctat
agcttgcctgaacttgatgtagaaatggtggaccttagcgagatttttgacagcgcctat
attcgccaggaggagccagagcttccggaagtatcagaattagatattatgcgtcactat
acagcattatcgcgccgtaatcacggtgttgattccggtttttatccgttgggttcttgt
accatgaaatacaacccgaaaattaatgagaatgtagctcgctttcctgggttttcctat
attcatccgctgcaagatgaaagtaccgtgcaaggcgcactagaattaatgtacgattta
caagaacatttaaaagaaatcacaggcatggatgaagtgacacttcagcctgctgccggc
gcgcatggtgaatggacaggcttaatgctcattcgagcttatcatgaggcacgtcaagat
tttaaacgtacaaaggttattgtaccagattctgcgcatggtacgaatccagcctctgca
acggtagctggatttgaaacaatcactgtaaaatctaacgaagctggacttgttgatctt
gaagacttaaaacgagttgtggatgaacatacagctgcacttatgttgacaaatcctaac
acactcggtttatttgaggagcatattttagaaatggcagaaatcgtccatgaggcgggc
ggtaaactgtattatgatggagcaaacttaaatgctgtattaagtaaagcacgtccgggt
gatatgggctttgatgtagtgcacttgaatttgcacaaaacgttcacaggtcctcatggt
ggcggtggtccgggttcaggcccagttggcgtaaaagcggacttaattccatatttgcca
aaaccaattctagaaaagacatcagaaggctaccgtttcaactatgatcgtccgcaatcg
atcgggcgtgtaaaaccatattacggaaacttcggcattaacgtacgtgcatatacgtat
atccgttccatgggacctgatggattaaaacgagtaacagaagaagccgttctaaatgca
aactatatgatgcgacgtctggctccgtactacgatctaccatttgataagcactgcaag
catgaatttgtattatctggaagacgtcagaaaaagcttggtgtccgtacgcttgacatt
gcaaagcgcttgcttgactttgggtatcacccgccaacaatttacttcccactcaatgtg
gaagaatgtatcatgattgagccaacagaaacagagtcaaaagaaacattagacgcattc
attgatgcaatgattcaaattgcaaaagaagcagaagaaaatccagagattgtacaagaa
gcacctcatacaactgttattaaacgcttggatgaaacaatggcagcgcgtaaaccaatt
cttaaatttgaaaagtaa
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